Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 Y_RNA.233-201ENST00000364407 101 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 Y_RNA.357-201ENST00000365487 109 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 MIR570-201ENST00000384917 97 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 RNU6-910P-201ENST00000390844 107 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 SNORD28B-201ENST00000390993 75 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 RNU6-588P-201ENST00000410281 105 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 AL035398.1-201ENST00000430869 322 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 AC048334.1-201ENST00000477975 159 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 MIR3129-201ENST00000581095 76 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 MIR4264-201ENST00000583520 66 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 snoU2_19.4-201ENST00000364329 80 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 RNU1-133P-201ENST00000364867 167 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 SNORD61-201ENST00000384252 73 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 SNORA26.6-201ENST00000391256 115 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 AC087499.4-201ENST00000448505 178 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 RNU6-922P-201ENST00000516753 99 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 AC021443.1-201ENST00000604478 211 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 AC103810.9-201ENST00000606688 112 ntBASIC1.2□□□□□ -2.22
SMCHD1A6NHR9 MIR302D-201ENST00000362275 68 ntBASIC1.19□□□□□ -2.22
SMCHD1A6NHR9 RNU6-349P-201ENST00000362402 107 ntBASIC1.19□□□□□ -2.22
SMCHD1A6NHR9 RNA5SP325-201ENST00000363756 130 ntBASIC1.19□□□□□ -2.22
SMCHD1A6NHR9 Y_RNA.240-201ENST00000364469 95 ntBASIC1.19□□□□□ -2.22
SMCHD1A6NHR9 RNU6-907P-201ENST00000390924 102 ntBASIC1.19□□□□□ -2.22
SMCHD1A6NHR9 RNU6-275P-201ENST00000364910 107 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 RNU6-396P-201ENST00000365369 105 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 snoU13.2-201ENST00000459201 104 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 AC113410.1-201ENST00000505029 247 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 RN7SKP88-201ENST00000516847 250 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 AP003484.1-201ENST00000530974 250 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 MIR8055-201ENST00000610739 97 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 7SK.8-201ENST00000612110 250 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 7SK.11-201ENST00000615477 250 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 7SK.13-201ENST00000622040 250 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 MTND5P32-201ENST00000560711 1802 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 Y_RNA.441-201ENST00000384123 112 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 MIR676-201ENST00000390702 67 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 Y_RNA.622-201ENST00000411091 108 ntBASIC1.18□□□□□ -2.22
SMCHD1A6NHR9 MIR342-201ENST00000362212 99 ntBASIC1.17□□□□□ -2.22
SMCHD1A6NHR9 MIR1302-7-201ENST00000408841 72 ntBASIC1.17□□□□□ -2.22
SMCHD1A6NHR9 SNX2P2-201ENST00000424553 323 ntBASIC1.17□□□□□ -2.22
SMCHD1A6NHR9 snoU13.21-201ENST00000459368 105 ntBASIC1.17□□□□□ -2.22
SMCHD1A6NHR9 RNU6-947P-201ENST00000516264 106 ntBASIC1.17□□□□□ -2.22
SMCHD1A6NHR9 MIR378D2-201ENST00000580636 98 ntBASIC1.17□□□□□ -2.22
SMCHD1A6NHR9 AC027335.2-201ENST00000624030 375 ntBASIC1.17□□□□□ -2.22
SMCHD1A6NHR9 RNU6-309P-201ENST00000364573 106 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 RPS29P28-201ENST00000446439 141 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 RPS26P48-201ENST00000491713 339 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 CYCTP-201ENST00000504253 315 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 RNU7-41P-201ENST00000515917 61 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 RNU7-121P-201ENST00000516604 62 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 RNU2-60P-201ENST00000517290 128 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 MIR3152-201ENST00000579801 74 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 MIR4714-201ENST00000580728 77 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 SNORA70.7-201ENST00000384159 133 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 MT-TN-201ENST00000387400 73 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 MT-TR-201ENST00000387439 65 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 RNU6-955P-201ENST00000410497 104 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 RNU2-13P-201ENST00000515909 113 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 RNU6-322P-201ENST00000516010 103 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 SNORD116-25-201ENST00000516517 92 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 AC015726.2-201ENST00000620112 122 ntBASIC1.16□□□□□ -2.22
SMCHD1A6NHR9 SNORA2B-201ENST00000384583 137 ntBASIC1.15□□□□□ -2.22
SMCHD1A6NHR9 AC027119.1-201ENST00000440877 241 ntBASIC1.15□□□□□ -2.22
SMCHD1A6NHR9 RNU6-1299P-201ENST00000516316 100 ntBASIC1.15□□□□□ -2.22
SMCHD1A6NHR9 RNU6-426P-201ENST00000516464 97 ntBASIC1.15□□□□□ -2.22
SMCHD1A6NHR9 MIR3664-201ENST00000579074 99 ntBASIC1.15□□□□□ -2.22
SMCHD1A6NHR9 Y_RNA.778-201ENST00000620203 90 ntBASIC1.15□□□□□ -2.22
SMCHD1A6NHR9 AL161722.3-201ENST00000605789 2983 ntBASIC1.15□□□□□ -2.23
SMCHD1A6NHR9 SNORA1-201ENST00000384107 130 ntBASIC1.15□□□□□ -2.23
SMCHD1A6NHR9 AC090844.1-201ENST00000422019 156 ntBASIC1.15□□□□□ -2.23
SMCHD1A6NHR9 AL121914.1-201ENST00000450188 156 ntBASIC1.15□□□□□ -2.23
SMCHD1A6NHR9 AC107027.2-201ENST00000512197 115 ntBASIC1.15□□□□□ -2.23
SMCHD1A6NHR9 RN7SKP19-201ENST00000516016 252 ntBASIC1.15□□□□□ -2.23
SMCHD1A6NHR9 RNA5SP436-201ENST00000516020 115 ntBASIC1.15□□□□□ -2.23
SMCHD1A6NHR9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.14□□□□□ -2.23
SMCHD1A6NHR9 RNU6-747P-201ENST00000390928 104 ntBASIC1.14□□□□□ -2.23
SMCHD1A6NHR9 RNU6-241P-201ENST00000391148 104 ntBASIC1.14□□□□□ -2.23
SMCHD1A6NHR9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
SMCHD1A6NHR9 RNU6-177P-201ENST00000411257 104 ntBASIC1.14□□□□□ -2.23
SMCHD1A6NHR9 RNU6-938P-201ENST00000411285 103 ntBASIC1.14□□□□□ -2.23
SMCHD1A6NHR9 MIR5197-201ENST00000583721 112 ntBASIC1.14□□□□□ -2.23
SMCHD1A6NHR9 MIR3658-201ENST00000636291 56 ntBASIC1.14□□□□□ -2.23
SMCHD1A6NHR9 SNORD18B-201ENST00000365659 72 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 MIR19B1-201ENST00000384829 87 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 RNU6-394P-201ENST00000410735 107 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 RNU6-902P-201ENST00000517212 91 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 MTND5P41-201ENST00000517498 206 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 AC004812.1-201ENST00000540773 146 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 MIR3192-201ENST00000584920 77 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 MIR8063-201ENST00000621930 81 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 AC091932.4-201ENST00000623386 200 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 MIR302B-201ENST00000362188 73 ntBASIC1.13□□□□□ -2.23
SMCHD1A6NHR9 Y_RNA.52-201ENST00000362760 96 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms