Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MIR548X2-201ENST00000579776 100 ntBASIC1.46□□□□□ -2.18
MBD3L4A6NDZ8 AL512598.1-201ENST00000610158 273 ntBASIC1.46□□□□□ -2.18
MBD3L4A6NDZ8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.46□□□□□ -2.18
MBD3L4A6NDZ8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 RNY1P11-201ENST00000363759 113 ntBASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 SNORD18B-201ENST00000365659 72 ntBASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 Y_RNA.488-201ENST00000384403 102 ntBASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 AC245047.7-201ENST00000440265 293 ntBASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 snoU13.25-201ENST00000458945 104 ntBASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 MIR548AO-201ENST00000579992 96 ntBASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 BX248123.2-201ENST00000606318 124 ntBASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.45□□□□□ -2.18
MBD3L4A6NDZ8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 SNORD48-201ENST00000364953 64 ntBASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 RNU7-73P-201ENST00000458743 63 ntBASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 RN7SL274P-201ENST00000492268 272 ntBASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 SNORA31.4-201ENST00000516049 129 ntBASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 RNU6-346P-201ENST00000516288 111 ntBASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 SNORD53B-201ENST00000577887 78 ntBASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
MBD3L4A6NDZ8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 RNU6-913P-201ENST00000390913 95 ntBASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 RNU6-460P-201ENST00000391158 108 ntBASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 MTATP6P21-201ENST00000440681 189 ntBASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 MIR3122-201ENST00000577243 73 ntBASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MBD3L4A6NDZ8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.42□□□□□ -2.18
MBD3L4A6NDZ8 RNA5SP264-201ENST00000363115 107 ntBASIC1.42□□□□□ -2.18
MBD3L4A6NDZ8 RNY1P5-201ENST00000383890 115 ntBASIC1.42□□□□□ -2.18
MBD3L4A6NDZ8 Y_RNA.506-201ENST00000384494 102 ntBASIC1.42□□□□□ -2.18
MBD3L4A6NDZ8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.42□□□□□ -2.18
MBD3L4A6NDZ8 SUMO1P3-201ENST00000439961 304 ntBASIC1.42□□□□□ -2.18
MBD3L4A6NDZ8 RNU7-197P-201ENST00000458836 62 ntBASIC1.42□□□□□ -2.18
MBD3L4A6NDZ8 RNU6-774P-201ENST00000363238 107 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 RNU6-915P-201ENST00000364943 103 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 Y_RNA.343-201ENST00000365354 112 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 SNORA20-201ENST00000384662 132 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 MIR222-201ENST00000384992 110 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 MIR569-201ENST00000385228 96 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 RNU6-910P-201ENST00000390844 107 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 RNA5SP236-201ENST00000516169 116 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 RNU6-426P-201ENST00000516464 97 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 Y_RNA.686-201ENST00000516548 134 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 Y_RNA.690-201ENST00000516603 95 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 Y_RNA.703-201ENST00000516846 111 ntBASIC1.41□□□□□ -2.18
MBD3L4A6NDZ8 Y_RNA.116-201ENST00000363292 103 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 Y_RNA.120-201ENST00000363304 110 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 SNORA1.1-201ENST00000364671 133 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 RNU4-16P-201ENST00000364737 141 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 Y_RNA.420-201ENST00000384043 110 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 RNY1P6-201ENST00000384193 109 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 MIR517C-201ENST00000385103 95 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 MIR518E-201ENST00000385252 88 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-1190P-201ENST00000410811 104 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 HMGN1P33-201ENST00000432945 451 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 RNU7-45P-201ENST00000459460 63 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 RNU5E-3P-201ENST00000515913 68 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 RNU2-60P-201ENST00000517290 128 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 MIR3133-201ENST00000583157 78 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 AL020996.3-201ENST00000606617 222 ntBASIC1.4□□□□□ -2.19
MBD3L4A6NDZ8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
MBD3L4A6NDZ8 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
MBD3L4A6NDZ8 MIR1185-1-201ENST00000408598 86 ntBASIC1.39□□□□□ -2.19
MBD3L4A6NDZ8 RNA5SP272-201ENST00000516095 111 ntBASIC1.39□□□□□ -2.19
MBD3L4A6NDZ8 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 Y_RNA.330-201ENST00000365230 109 ntBASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-125P-201ENST00000384505 107 ntBASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 SNORA67.6-201ENST00000391093 99 ntBASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 MIR548M-201ENST00000408260 86 ntBASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 RNA5SP261-201ENST00000410536 106 ntBASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 AP001328.1-201ENST00000528550 176 ntBASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-396P-201ENST00000365369 105 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-746P-201ENST00000384112 109 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 SNORA75.2-201ENST00000391138 150 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 SNORA75.3-201ENST00000391231 150 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 AL603908.1-201ENST00000406098 201 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 MIR1302-7-201ENST00000408841 72 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 MIR2115-201ENST00000516657 100 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 SNORA70.22-201ENST00000517160 124 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 AP003716.2-201ENST00000528260 108 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 AL022345.2-201ENST00000606307 135 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.37□□□□□ -2.19
MBD3L4A6NDZ8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-508P-201ENST00000363231 103 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 Y_RNA.224-201ENST00000364308 111 ntBASIC1.36□□□□□ -2.19
MBD3L4A6NDZ8 RNU6-392P-201ENST00000364926 101 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms