Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SNORD24-201ENST00000383884 75 ntBASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 RNU4-43P-201ENST00000410628 137 ntBASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 AC063976.4-201ENST00000421971 163 ntBASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 AC245047.7-201ENST00000440265 293 ntBASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 RNU7-120P-201ENST00000459334 63 ntBASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 RNU2-13P-201ENST00000515909 113 ntBASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 RNU6-830P-201ENST00000516353 107 ntBASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 AP003484.1-201ENST00000530974 250 ntBASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 FAM71BP1-201ENST00000604431 523 ntBASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.96□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.121-201ENST00000363309 113 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.370-201ENST00000365589 108 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 RNU6-597P-201ENST00000365620 102 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.435-201ENST00000384095 112 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 RNY3P5-201ENST00000384127 102 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 AP003716.2-201ENST00000528260 108 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 MIR4662B-201ENST00000579498 81 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 MIR3973-201ENST00000579824 107 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 uc_338.6-201ENST00000613544 171 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 MIR4251-201ENST00000635819 61 ntBASIC0.95□□□□□ -2.26
TRIM49BA6NDI0 MIR373-201ENST00000362273 69 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.29-201ENST00000362570 113 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 RNU6-804P-201ENST00000384286 107 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 POLR2J4-204ENST00000418424 324 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 AC015818.7-201ENST00000428754 109 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 AC087499.7-201ENST00000441958 109 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 snoU13.21-201ENST00000459368 105 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 RNA5SP153-201ENST00000516498 76 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 RNU6-504P-201ENST00000516568 104 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 MTND5P41-201ENST00000517498 206 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 MIR378D2-201ENST00000580636 98 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 AC022709.1-201ENST00000615967 87 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 MIR6788-201ENST00000618842 66 ntBASIC0.94□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.8-201ENST00000362353 102 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.240-201ENST00000364469 95 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 SNORD114-24-201ENST00000365029 72 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.440-201ENST00000384120 114 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 RNU6-125P-201ENST00000384505 107 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 MIR548J-201ENST00000408833 112 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 RNU6-1135P-201ENST00000411083 103 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 RNU2-55P-201ENST00000411146 174 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 AC108059.2-201ENST00000434626 151 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 RNA5SP272-201ENST00000516095 111 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 RNU7-43P-201ENST00000516554 64 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 RNU6-958P-201ENST00000516995 106 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 AC023827.1-201ENST00000569247 97 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 MIR4431-201ENST00000579990 94 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 AC243994.1-201ENST00000618627 109 ntBASIC0.93□□□□□ -2.26
TRIM49BA6NDI0 MIR103A2-201ENST00000362154 78 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.330-201ENST00000365230 109 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 SNORA51.10-201ENST00000384418 136 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 SNORA80D-201ENST00000384488 135 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 RNU6-588P-201ENST00000410281 105 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 SCARNA15-202ENST00000516881 127 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 RNU2-60P-201ENST00000517290 128 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 MIR151B-201ENST00000584249 96 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 AC072026.1-201ENST00000605023 201 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 MIR6516-201ENST00000630554 81 ntBASIC0.92□□□□□ -2.26
TRIM49BA6NDI0 RNA5SP264-201ENST00000363115 107 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 RNU4-84P-201ENST00000364200 139 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 RNU4-16P-201ENST00000364737 141 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.354-201ENST00000365448 111 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 Y_RNA.785-201ENST00000384290 109 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 SNORA27-201ENST00000384323 126 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 SNORD79.1-201ENST00000516069 84 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 RNU6-1149P-201ENST00000516810 97 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 MIR5197-201ENST00000583721 112 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 AL365205.2-201ENST00000594586 68 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 PRELID3BP2-201ENST00000605362 201 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 FTX_2.1-201ENST00000618816 94 ntBASIC0.91□□□□□ -2.26
TRIM49BA6NDI0 AC008163.1-202ENST00000636004 2889 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.398-201ENST00000383952 99 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 RNU6-1189P-201ENST00000383958 107 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.521-201ENST00000384560 114 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 RNU6-205P-201ENST00000390858 107 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 RNU2-64P-201ENST00000411315 191 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 AC002429.1-201ENST00000437672 148 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 AL392103.1-201ENST00000447000 198 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 RNU2-11P-201ENST00000459191 187 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 SNORD124-201ENST00000459577 104 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 SNORD116-25-201ENST00000516517 92 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 RNU6-794P-201ENST00000517261 64 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 RNU6-94P-201ENST00000607728 107 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 AC134878.1-201ENST00000619901 243 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 AC021753.1-201ENST00000635724 168 ntBASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-34-201ENST00000362441 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-12-201ENST00000362583 82 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 Y_RNA.52-201ENST00000362760 96 ntBASIC0.89□□□□□ -2.27
TRIM49BA6NDI0 SNORD115-29-201ENST00000362834 82 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms