Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 AC084768.2-201ENST00000622736 221 ntBASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC163A0A0D9SF12 RNA5SP37-201ENST00000365420 130 ntBASIC1.87□□□□□ -2.11
CCDC163A0A0D9SF12 AP1B1P2-201ENST00000416196 106 ntBASIC1.87□□□□□ -2.11
CCDC163A0A0D9SF12 RPL30P7-201ENST00000479312 323 ntBASIC1.87□□□□□ -2.11
CCDC163A0A0D9SF12 RNA5SP445-201ENST00000515889 115 ntBASIC1.87□□□□□ -2.11
CCDC163A0A0D9SF12 RNU2-13P-201ENST00000515909 113 ntBASIC1.87□□□□□ -2.11
CCDC163A0A0D9SF12 MIR3664-201ENST00000579074 99 ntBASIC1.87□□□□□ -2.11
CCDC163A0A0D9SF12 MIR7111-201ENST00000619751 72 ntBASIC1.87□□□□□ -2.11
CCDC163A0A0D9SF12 RNU6-690P-201ENST00000365242 106 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 MIR9-3-201ENST00000385084 90 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 RPS27P16-201ENST00000425758 201 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 AC245517.4-201ENST00000448601 281 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 RNU6-240P-201ENST00000516098 97 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 RN7SKP88-201ENST00000516847 250 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 RNU6-789P-201ENST00000517105 102 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 MIR3121-201ENST00000579680 77 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 7SK.8-201ENST00000612110 250 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 7SK.11-201ENST00000615477 250 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 AL121890.5-201ENST00000620848 304 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 7SK.13-201ENST00000622040 250 ntBASIC1.86□□□□□ -2.11
CCDC163A0A0D9SF12 RNU6-235P-201ENST00000362644 107 ntBASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 Y_RNA.114-201ENST00000363265 113 ntBASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 MIR539-201ENST00000365690 78 ntBASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 MIR499A-201ENST00000384903 122 ntBASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 RNU6-913P-201ENST00000390913 95 ntBASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 Y_RNA.651-201ENST00000459380 103 ntBASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 AC132825.6-201ENST00000638861 357 ntBASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
CCDC163A0A0D9SF12 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CCDC163A0A0D9SF12 RNY1P6-201ENST00000384193 109 ntBASIC1.84□□□□□ -2.11
CCDC163A0A0D9SF12 snoU13.16-201ENST00000459350 104 ntBASIC1.84□□□□□ -2.11
CCDC163A0A0D9SF12 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.11
CCDC163A0A0D9SF12 TRMT112P2-201ENST00000512910 132 ntBASIC1.84□□□□□ -2.11
CCDC163A0A0D9SF12 MIR548AO-201ENST00000579992 96 ntBASIC1.84□□□□□ -2.11
CCDC163A0A0D9SF12 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
CCDC163A0A0D9SF12 MIR8070-201ENST00000616510 88 ntBASIC1.84□□□□□ -2.11
CCDC163A0A0D9SF12 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC163A0A0D9SF12 HMGN1P33-201ENST00000432945 451 ntBASIC1.83□□□□□ -2.12
CCDC163A0A0D9SF12 AC009474.2-201ENST00000451383 136 ntBASIC1.83□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-1234P-201ENST00000516877 103 ntBASIC1.83□□□□□ -2.12
CCDC163A0A0D9SF12 CYP3A52P-201ENST00000563326 91 ntBASIC1.83□□□□□ -2.12
CCDC163A0A0D9SF12 AP000553.5-201ENST00000641933 54 ntBASIC1.83□□□□□ -2.12
CCDC163A0A0D9SF12 SNORA24-201ENST00000384096 131 ntBASIC1.82□□□□□ -2.12
CCDC163A0A0D9SF12 RNU4-62P-201ENST00000410125 130 ntBASIC1.82□□□□□ -2.12
CCDC163A0A0D9SF12 AL606753.1-201ENST00000427435 87 ntBASIC1.82□□□□□ -2.12
CCDC163A0A0D9SF12 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-902P-201ENST00000517212 91 ntBASIC1.82□□□□□ -2.12
CCDC163A0A0D9SF12 MIR3152-201ENST00000579801 74 ntBASIC1.82□□□□□ -2.12
CCDC163A0A0D9SF12 MIR502-201ENST00000606349 86 ntBASIC1.82□□□□□ -2.12
CCDC163A0A0D9SF12 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 RNA5SP48-201ENST00000363969 126 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 Y_RNA.508-201ENST00000384502 114 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 SNORA19-201ENST00000384737 128 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-1190P-201ENST00000410811 104 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 RNU7-73P-201ENST00000458743 63 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 RNU1-98P-201ENST00000458992 160 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 AL133373.1-201ENST00000497098 94 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 RNA5SP364-201ENST00000516938 78 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 DNAJC19P9-201ENST00000555084 351 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 AC133485.4-201ENST00000561835 220 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 AC138907.4-201ENST00000570107 226 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 AC108081.1-201ENST00000604358 221 ntBASIC1.81□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-349P-201ENST00000362402 107 ntBASIC1.8□□□□□ -2.12
CCDC163A0A0D9SF12 SNORA1.1-201ENST00000364671 133 ntBASIC1.8□□□□□ -2.12
CCDC163A0A0D9SF12 Y_RNA.366-201ENST00000365540 102 ntBASIC1.8□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-717P-201ENST00000459076 104 ntBASIC1.8□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-1061P-201ENST00000516530 99 ntBASIC1.8□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-165P-201ENST00000517170 99 ntBASIC1.8□□□□□ -2.12
CCDC163A0A0D9SF12 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC163A0A0D9SF12 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC163A0A0D9SF12 SNORA25.9-201ENST00000365087 128 ntBASIC1.79□□□□□ -2.12
CCDC163A0A0D9SF12 SNORA31.4-201ENST00000516049 129 ntBASIC1.79□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-113P-201ENST00000516653 101 ntBASIC1.79□□□□□ -2.12
CCDC163A0A0D9SF12 AL020996.3-201ENST00000606617 222 ntBASIC1.79□□□□□ -2.12
CCDC163A0A0D9SF12 AL512598.1-201ENST00000610158 273 ntBASIC1.79□□□□□ -2.12
CCDC163A0A0D9SF12 AL137067.1-201ENST00000615933 120 ntBASIC1.79□□□□□ -2.12
CCDC163A0A0D9SF12 AC021613.1-201ENST00000623880 111 ntBASIC1.79□□□□□ -2.12
CCDC163A0A0D9SF12 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-647P-201ENST00000364243 107 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 RNA5SP160-201ENST00000364866 120 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 RNU6-959P-201ENST00000384671 107 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 MIR1263-201ENST00000408324 86 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 RNA5SP338-201ENST00000410495 85 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 RNA5SP261-201ENST00000410536 106 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 AL158147.1-201ENST00000443970 75 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 AC021443.1-201ENST00000604478 211 ntBASIC1.78□□□□□ -2.12
CCDC163A0A0D9SF12 AL157777.2-201ENST00000258070 137 ntBASIC1.77□□□□□ -2.13
CCDC163A0A0D9SF12 MIR103A2-201ENST00000362154 78 ntBASIC1.77□□□□□ -2.13
CCDC163A0A0D9SF12 RNA5SP138-201ENST00000365098 114 ntBASIC1.77□□□□□ -2.13
CCDC163A0A0D9SF12 Y_RNA.355-201ENST00000365462 98 ntBASIC1.77□□□□□ -2.13
CCDC163A0A0D9SF12 RNU6-81P-201ENST00000365608 104 ntBASIC1.77□□□□□ -2.13
CCDC163A0A0D9SF12 MIR518E-201ENST00000385252 88 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms