Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC024614.2-201ENST00000577584 372 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR548AO-201ENST00000579992 96 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR3910-1-201ENST00000580936 111 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 TUG1_4.1-201ENST00000619464 181 ntBASIC1.27□□□□□ -2.21
IGHV4-28A0A0C4DH34 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNY1P6-201ENST00000384193 109 ntBASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 HMGN1P33-201ENST00000432945 451 ntBASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-1211P-201ENST00000459179 105 ntBASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-971P-201ENST00000516920 106 ntBASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR4419B-201ENST00000577260 68 ntBASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 Y_RNA.757-201ENST00000578934 114 ntBASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR3121-201ENST00000579680 77 ntBASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
IGHV4-28A0A0C4DH34 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-349P-201ENST00000362402 107 ntBASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNA5SP432-201ENST00000362480 116 ntBASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-690P-201ENST00000365242 106 ntBASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-482P-201ENST00000391068 107 ntBASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 RPL31P63-201ENST00000422565 375 ntBASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-240P-201ENST00000516098 97 ntBASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR3618-201ENST00000580330 88 ntBASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR502-201ENST00000606349 86 ntBASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 AL020996.3-201ENST00000606617 222 ntBASIC1.25□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU1-17P-201ENST00000363022 152 ntBASIC1.24□□□□□ -2.21
IGHV4-28A0A0C4DH34 Y_RNA.114-201ENST00000363265 113 ntBASIC1.24□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNA5SP190-201ENST00000365222 118 ntBASIC1.24□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-237P-201ENST00000515985 71 ntBASIC1.24□□□□□ -2.21
IGHV4-28A0A0C4DH34 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.24□□□□□ -2.21
IGHV4-28A0A0C4DH34 AC108081.1-201ENST00000604358 221 ntBASIC1.24□□□□□ -2.21
IGHV4-28A0A0C4DH34 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
IGHV4-28A0A0C4DH34 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.23□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR539-201ENST00000365690 78 ntBASIC1.23□□□□□ -2.21
IGHV4-28A0A0C4DH34 SNORD13-201ENST00000459299 104 ntBASIC1.23□□□□□ -2.21
IGHV4-28A0A0C4DH34 AC048334.1-201ENST00000477975 159 ntBASIC1.23□□□□□ -2.21
IGHV4-28A0A0C4DH34 AL133373.1-201ENST00000497098 94 ntBASIC1.23□□□□□ -2.21
IGHV4-28A0A0C4DH34 DNAJC19P9-201ENST00000555084 351 ntBASIC1.23□□□□□ -2.21
IGHV4-28A0A0C4DH34 AC021613.1-201ENST00000623880 111 ntBASIC1.23□□□□□ -2.21
IGHV4-28A0A0C4DH34 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR103A2-201ENST00000362154 78 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-235P-201ENST00000362644 107 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 SNORA1.1-201ENST00000364671 133 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 Y_RNA.366-201ENST00000365540 102 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 SNORA26.6-201ENST00000391256 115 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 AC090844.1-201ENST00000422019 156 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNU6-113P-201ENST00000516653 101 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR3683-201ENST00000580847 82 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 AP000942.3-201ENST00000603702 160 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 AC012493.3-201ENST00000604494 112 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 MIR6717-201ENST00000622747 73 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 AC132825.6-201ENST00000638861 357 ntBASIC1.22□□□□□ -2.21
IGHV4-28A0A0C4DH34 RNA5SP264-201ENST00000363115 107 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 Y_RNA.280-201ENST00000364765 112 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-1319P-201ENST00000390855 104 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-747P-201ENST00000390928 104 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-241P-201ENST00000391148 104 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR1302-7-201ENST00000408841 72 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-177P-201ENST00000411257 104 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 AL158147.1-201ENST00000443970 75 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 AC133485.4-201ENST00000561835 220 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 AC138907.4-201ENST00000570107 226 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR3122-201ENST00000577243 73 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR8055-201ENST00000610739 97 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.21□□□□□ -2.22
IGHV4-28A0A0C4DH34 Y_RNA.140-201ENST00000363474 103 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 Y_RNA.218-201ENST00000364218 104 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 SNORD48-201ENST00000364953 64 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR1185-1-201ENST00000408598 86 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNA5SP261-201ENST00000410536 106 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-1054P-201ENST00000411293 104 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 AC245047.7-201ENST00000440265 293 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-1234P-201ENST00000516877 103 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 AP003716.2-201ENST00000528260 108 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR3152-201ENST00000579801 74 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 AC021443.1-201ENST00000604478 211 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR8065-201ENST00000620577 100 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 Z97988.1-201ENST00000637697 135 ntBASIC1.2□□□□□ -2.22
IGHV4-28A0A0C4DH34 SNORA22.1-201ENST00000362701 134 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-647P-201ENST00000364243 107 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-81P-201ENST00000365608 104 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-959P-201ENST00000384671 107 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 RPS3AP1-201ENST00000413190 320 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-789P-201ENST00000517105 102 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 IGKV1-22-201ENST00000524313 326 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR4305-201ENST00000583252 102 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 PRELID3BP2-201ENST00000605362 201 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 AL137067.1-201ENST00000615933 120 ntBASIC1.19□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNA5SP144-201ENST00000410846 116 ntBASIC1.18□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-602P-201ENST00000411155 105 ntBASIC1.18□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU7-164P-201ENST00000459221 62 ntBASIC1.18□□□□□ -2.22
IGHV4-28A0A0C4DH34 RN7SKP19-201ENST00000516016 252 ntBASIC1.18□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNA5SP458-201ENST00000516188 119 ntBASIC1.18□□□□□ -2.22
IGHV4-28A0A0C4DH34 MIR4255-201ENST00000579351 72 ntBASIC1.18□□□□□ -2.22
IGHV4-28A0A0C4DH34 RNU6-396P-201ENST00000365369 105 ntBASIC1.17□□□□□ -2.22
IGHV4-28A0A0C4DH34 POLR2J4-204ENST00000418424 324 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms