Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 RNU6-448P-201ENST00000517052 107 ntBASIC0.15□□□□□ -2.39
TRAV39A0A0B4J263 PVT1_3.1-201ENST00000620853 95 ntBASIC0.15□□□□□ -2.39
TRAV39A0A0B4J263 MIR30D-201ENST00000362283 70 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.16-201ENST00000362421 102 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.19-201ENST00000362462 99 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.217-201ENST00000364214 105 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-806P-201ENST00000365147 105 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-326P-201ENST00000365480 107 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-1189P-201ENST00000383958 107 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 SNORA8.2-201ENST00000384372 139 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 MIR489-201ENST00000384923 84 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 MIR526A2-201ENST00000390198 65 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 SNORD93-201ENST00000408813 74 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 ELOCP20-201ENST00000422460 345 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 RPL39P25-201ENST00000449384 154 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.641-201ENST00000459414 105 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 RNU7-96P-201ENST00000459535 64 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.631-201ENST00000459607 101 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.721-201ENST00000517207 102 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 AC133485.4-201ENST00000561835 220 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 MIR4801-201ENST00000582704 82 ntBASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.14□□□□□ -2.39
TRAV39A0A0B4J263 MIR302B-201ENST00000362188 73 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.91-201ENST00000363042 107 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-770P-201ENST00000363929 105 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.229-201ENST00000364347 113 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 SNORD42.2-201ENST00000365570 69 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 RNY1P4-201ENST00000384595 115 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 SNORA8.3-201ENST00000384679 139 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 MT-TF-201ENST00000387314 71 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.622-201ENST00000411091 108 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 SCARNA24.2-201ENST00000516968 130 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 AP003327.1-201ENST00000529684 127 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 AC023932.2-201ENST00000603176 175 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 MIR924-201ENST00000638017 53 ntBASIC0.13□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.26-201ENST00000362539 101 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.28-201ENST00000362554 111 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.66-201ENST00000362862 102 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 SNORD118-201ENST00000363593 134 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.214-201ENST00000364201 112 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.476-201ENST00000384347 108 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 MIR563-201ENST00000385080 79 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 RNU4-83P-201ENST00000410863 133 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.617-201ENST00000410920 90 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 AL731563.1-201ENST00000442202 214 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-1299P-201ENST00000516316 100 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-126P-201ENST00000516685 103 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 AP003733.2-201ENST00000529409 171 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 MIR1273G-201ENST00000577677 100 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 AP001282.2-201ENST00000616149 309 ntBASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.64-201ENST00000362845 102 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 SNORD114-26-201ENST00000363543 72 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.210-201ENST00000364161 110 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-211P-201ENST00000384047 107 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-815P-201ENST00000384080 113 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.431-201ENST00000384086 102 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.440-201ENST00000384120 114 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 MIR644A-201ENST00000385262 94 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 MT-TT-201ENST00000387460 66 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 AC131281.1-201ENST00000522984 164 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 MIR6717-201ENST00000622747 73 ntBASIC0.11□□□□□ -2.39
TRAV39A0A0B4J263 MIR330-201ENST00000362196 94 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-403P-201ENST00000363163 104 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-740P-201ENST00000364734 105 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.634-201ENST00000364811 113 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.304-201ENST00000365011 112 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.351-201ENST00000365436 96 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-597P-201ENST00000365620 102 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.410-201ENST00000383992 113 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-474P-201ENST00000384243 107 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.527-201ENST00000384573 102 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 RNA5SP237-201ENST00000410414 113 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 MTND5P22-201ENST00000458380 195 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-469P-201ENST00000516253 101 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 RNU6-988P-201ENST00000519081 107 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 MIR4431-201ENST00000579990 94 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.1□□□□□ -2.39
TRAV39A0A0B4J263 Y_RNA.117-201ENST00000363294 101 ntBASIC0.09□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.432-201ENST00000384087 111 ntBASIC0.09□□□□□ -2.4
TRAV39A0A0B4J263 RNU6-1228P-201ENST00000391014 107 ntBASIC0.09□□□□□ -2.4
TRAV39A0A0B4J263 SNORA26-201ENST00000391286 122 ntBASIC0.09□□□□□ -2.4
TRAV39A0A0B4J263 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
TRAV39A0A0B4J263 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.09□□□□□ -2.4
TRAV39A0A0B4J263 AC022028.1-201ENST00000412054 408 ntBASIC0.09□□□□□ -2.4
TRAV39A0A0B4J263 AC078938.1-201ENST00000620993 318 ntBASIC0.09□□□□□ -2.4
TRAV39A0A0B4J263 SNORA36.1-201ENST00000363424 132 ntBASIC0.08□□□□□ -2.4
TRAV39A0A0B4J263 Y_RNA.199-201ENST00000364014 102 ntBASIC0.08□□□□□ -2.4
TRAV39A0A0B4J263 SNORA1-201ENST00000384107 130 ntBASIC0.08□□□□□ -2.4
TRAV39A0A0B4J263 RNU6-1289P-201ENST00000384431 106 ntBASIC0.08□□□□□ -2.4
TRAV39A0A0B4J263 MIR626-201ENST00000385032 94 ntBASIC0.08□□□□□ -2.4
TRAV39A0A0B4J263 SNORA26.6-201ENST00000391256 115 ntBASIC0.08□□□□□ -2.4
TRAV39A0A0B4J263 RNA5SP480-201ENST00000516840 109 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms