Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MTND1P2-201ENST00000430604 821 ntBASIC-1.19□□□□□ -2.6
TRAV5A0A0B4J249 AL445567.1-201ENST00000439121 144 ntBASIC-1.19□□□□□ -2.6
TRAV5A0A0B4J249 SNORA13-201ENST00000458790 133 ntBASIC-1.19□□□□□ -2.6
TRAV5A0A0B4J249 RN7SKP295-201ENST00000517264 153 ntBASIC-1.19□□□□□ -2.6
TRAV5A0A0B4J249 MIR4473-201ENST00000583731 91 ntBASIC-1.19□□□□□ -2.6
TRAV5A0A0B4J249 RNA5SP133-201ENST00000363368 119 ntBASIC-1.2□□□□□ -2.6
TRAV5A0A0B4J249 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.2□□□□□ -2.6
TRAV5A0A0B4J249 SNORA75-201ENST00000384158 137 ntBASIC-1.2□□□□□ -2.6
TRAV5A0A0B4J249 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.2□□□□□ -2.6
TRAV5A0A0B4J249 MTND3P12-201ENST00000559068 328 ntBASIC-1.2□□□□□ -2.6
TRAV5A0A0B4J249 MIR4280-201ENST00000582178 76 ntBASIC-1.2□□□□□ -2.6
TRAV5A0A0B4J249 AL049861.1-201ENST00000603130 150 ntBASIC-1.2□□□□□ -2.6
TRAV5A0A0B4J249 AC022960.3-201ENST00000619794 441 ntBASIC-1.2□□□□□ -2.6
TRAV5A0A0B4J249 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 RNA5SP331-201ENST00000364986 107 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 RNY1P13-201ENST00000365030 105 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 MIR548A2-201ENST00000384956 97 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 MIR181B2-201ENST00000385004 89 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 RNU2-14P-201ENST00000411053 191 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 RNU6-175P-201ENST00000516896 107 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 AL512360.1-201ENST00000555346 234 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 AC092794.2-201ENST00000620933 563 ntBASIC-1.21□□□□□ -2.6
TRAV5A0A0B4J249 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.22□□□□□ -2.6
TRAV5A0A0B4J249 SNORA18-201ENST00000384416 132 ntBASIC-1.22□□□□□ -2.6
TRAV5A0A0B4J249 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.22□□□□□ -2.6
TRAV5A0A0B4J249 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
TRAV5A0A0B4J249 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.22□□□□□ -2.6
TRAV5A0A0B4J249 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.22□□□□□ -2.6
TRAV5A0A0B4J249 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
TRAV5A0A0B4J249 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.22□□□□□ -2.6
TRAV5A0A0B4J249 AL603755.1-201ENST00000619504 163 ntBASIC-1.22□□□□□ -2.6
TRAV5A0A0B4J249 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 SNORD61-201ENST00000384252 73 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-900P-201ENST00000384498 102 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 SNORD78.2-201ENST00000391076 69 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-864P-201ENST00000516256 108 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-566P-201ENST00000516790 107 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 MIR3145-201ENST00000580727 82 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 U6.109-201ENST00000636749 87 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 MIR4320-201ENST00000636981 65 ntBASIC-1.23□□□□□ -2.61
TRAV5A0A0B4J249 SNORD24-201ENST00000383884 75 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 SNORD56B-201ENST00000384713 71 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 SNX3P1X-201ENST00000414887 175 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 AF228730.3-201ENST00000436691 102 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 SNORA27.4-201ENST00000516650 95 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 MIR4659A-201ENST00000580269 81 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 AL162413.1-201ENST00000603198 110 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 AL021707.8-201ENST00000609428 183 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 MIR6851-201ENST00000617060 67 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 uc_338.10-201ENST00000621872 182 ntBASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.24□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-502P-201ENST00000362419 108 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 SNORD114-29-201ENST00000364819 70 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-901P-201ENST00000384593 106 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 SNORA69.1-201ENST00000390904 137 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 MTND3P3-201ENST00000505004 126 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 MIR4790-201ENST00000577799 79 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 MIR6841-201ENST00000637129 72 ntBASIC-1.25□□□□□ -2.61
TRAV5A0A0B4J249 RNU1-141P-201ENST00000364623 158 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-99P-201ENST00000364721 107 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 MIR539-201ENST00000365690 78 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-449P-201ENST00000383914 107 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 SNORA72.4-201ENST00000384174 132 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 AL160004.2-201ENST00000432935 350 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 AC100767.1-201ENST00000528178 123 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 AC073114.1-201ENST00000612027 490 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 AL050303.3-201ENST00000613704 284 ntBASIC-1.26□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 SNORA20-201ENST00000384662 132 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 AC009161.1-201ENST00000417306 376 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-956P-201ENST00000458868 103 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 RNU7-74P-201ENST00000459104 62 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 MIR4662B-201ENST00000579498 81 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 MIR3920-201ENST00000581751 86 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 NBR2-204ENST00000587322 63 ntBASIC-1.27□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-888P-201ENST00000363010 101 ntBASIC-1.28□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-483P-201ENST00000384088 108 ntBASIC-1.28□□□□□ -2.61
TRAV5A0A0B4J249 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms