Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 RNU6-147P-201ENST00000383983 107 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 Y_RNA.486-201ENST00000384398 107 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 RNU6-360P-201ENST00000390944 104 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 AL034345.1-201ENST00000407768 123 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 RNU6-1064P-201ENST00000410626 104 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 FTH1P12-201ENST00000432137 551 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 RNU6-772P-201ENST00000516042 105 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 SNORA44.1-201ENST00000517031 108 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 MIR3613-201ENST00000579844 87 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 MIR3660-201ENST00000584845 100 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 TUG1_4.1-201ENST00000619464 181 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 AP001340.1-201ENST00000624405 217 ntBASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.6□□□□□ -2.15
PCDHAC2Q9Y5I4 Y_RNA.66-201ENST00000362862 102 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 Y_RNA.280-201ENST00000364765 112 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 MIR539-201ENST00000365690 78 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 RNU6-1144P-201ENST00000384247 104 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 Y_RNA.563-201ENST00000384707 108 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 RNU6-476P-201ENST00000384726 107 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 CALM2P4-201ENST00000430810 426 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 snoU13.18-201ENST00000459483 104 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 RNU6-589P-201ENST00000516485 107 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 MIR378D2-201ENST00000580636 98 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 MIR4285-201ENST00000581001 85 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 MIR2681-201ENST00000581814 105 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 SNORA28-201ENST00000606769 126 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 AC103810.8-201ENST00000607347 118 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 AC021506.2-201ENST00000612354 169 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 RMST_2.1-201ENST00000617263 136 ntBASIC1.59□□□□□ -2.15
PCDHAC2Q9Y5I4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.59□□□□□ -2.16
PCDHAC2Q9Y5I4 Y_RNA.35-201ENST00000362601 101 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 SNORD68-201ENST00000363214 84 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 Y_RNA.114-201ENST00000363265 113 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-1056P-201ENST00000383996 107 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR548A2-201ENST00000384956 97 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 U8.16-201ENST00000391279 133 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-1061P-201ENST00000516530 99 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 Y_RNA.709-201ENST00000516952 92 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 Y_RNA.712-201ENST00000517011 92 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR3121-201ENST00000579680 77 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 U7.2-201ENST00000607576 63 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR376A2-201ENST00000636782 80 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR3914-2-201ENST00000637339 95 ntBASIC1.58□□□□□ -2.16
PCDHAC2Q9Y5I4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR450A1-201ENST00000362262 91 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-1255P-201ENST00000363434 112 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 Y_RNA.634-201ENST00000364811 113 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 SNORA1-201ENST00000384107 130 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-424P-201ENST00000384367 105 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 Y_RNA.584-201ENST00000391090 114 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 SNORA40.6-201ENST00000391153 128 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 RNA5SP482-201ENST00000391269 118 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 SNORA75.5-201ENST00000391291 81 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 RNA5SP89-201ENST00000410300 108 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU2-55P-201ENST00000411146 174 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 AL158147.1-201ENST00000443970 75 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 Y_RNA.651-201ENST00000459380 103 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-197P-201ENST00000516680 100 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU7-28P-201ENST00000516759 62 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 AC007751.1-201ENST00000529260 376 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR6078-201ENST00000611069 100 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 JPX_2.1-201ENST00000614161 69 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 AC095038.3-201ENST00000634439 195 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR6767-201ENST00000637302 66 ntBASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU1-93P-201ENST00000364704 169 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR548A1-201ENST00000385041 97 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR1267-201ENST00000408723 78 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 AL161935.2-201ENST00000414627 60 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 CYCTP-201ENST00000504253 315 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-970P-201ENST00000516312 107 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 AL160236.1-201ENST00000556317 195 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR3646-201ENST00000578301 84 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 Pinc.1-201ENST00000616452 154 ntBASIC1.56□□□□□ -2.16
PCDHAC2Q9Y5I4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-597P-201ENST00000365620 102 ntBASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 Y_RNA.432-201ENST00000384087 111 ntBASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR194-1-201ENST00000384892 85 ntBASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 AC063976.4-201ENST00000421971 163 ntBASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 AC114811.1-201ENST00000507207 168 ntBASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 RNA5SP168-201ENST00000516642 112 ntBASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 RNA5SP170-201ENST00000517150 101 ntBASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 AC090049.2-201ENST00000550377 109 ntBASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 MIR8074-201ENST00000615081 81 ntBASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
PCDHAC2Q9Y5I4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.54□□□□□ -2.16
PCDHAC2Q9Y5I4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.54□□□□□ -2.16
PCDHAC2Q9Y5I4 SNORD58C-201ENST00000365223 64 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms