Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NOD1Q9Y239 SNORD115-2-201ENST00000362842 82 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 Y_RNA.93-201ENST00000363066 109 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 Y_RNA.107-201ENST00000363190 121 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 RNU6-1099P-201ENST00000363533 107 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 Y_RNA.220-201ENST00000364244 109 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 SNORD115-20-201ENST00000365099 82 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 Y_RNA.470-201ENST00000384307 117 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 RNU6-1067P-201ENST00000384752 107 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 RNU6-913P-201ENST00000390913 95 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 RNA5SP100-201ENST00000410903 110 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 RNA5SP59-201ENST00000410922 110 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 RNA5SP450-201ENST00000411206 102 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 SCARNA23-201ENST00000516060 130 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 MIR7843-201ENST00000622274 79 ntBASIC2.84□□□□□ -1.95
NOD1Q9Y239 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.84□□□□□ -1.95
NOD1Q9Y239 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
NOD1Q9Y239 RNA5SP289-201ENST00000362332 137 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 RNU6-457P-201ENST00000363999 107 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 SNORA3A-201ENST00000364113 130 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 RNU4-67P-201ENST00000364569 141 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 RNU6-409P-201ENST00000384114 104 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 Y_RNA.558-201ENST00000384685 113 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 RNU6-733P-201ENST00000410759 104 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 RPS3AP1-201ENST00000413190 320 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 SNORA31.25-201ENST00000517242 134 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 MIR548AE2-201ENST00000583456 67 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 AL020996.3-201ENST00000606617 222 ntBASIC2.83□□□□□ -1.96
NOD1Q9Y239 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NOD1Q9Y239 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NOD1Q9Y239 Y_RNA.537-201ENST00000384626 109 ntBASIC2.82□□□□□ -1.96
NOD1Q9Y239 RNY1P7-201ENST00000384743 110 ntBASIC2.82□□□□□ -1.96
NOD1Q9Y239 SNORD77B-201ENST00000391112 67 ntBASIC2.82□□□□□ -1.96
NOD1Q9Y239 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.82□□□□□ -1.96
NOD1Q9Y239 RPL23AP6-201ENST00000446637 472 ntBASIC2.82□□□□□ -1.96
NOD1Q9Y239 SNORA31.17-201ENST00000516953 127 ntBASIC2.82□□□□□ -1.96
NOD1Q9Y239 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
NOD1Q9Y239 SNORD114-30-201ENST00000364448 72 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 Y_RNA.360-201ENST00000365512 102 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 Y_RNA.430-201ENST00000384081 110 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 MIR504-201ENST00000385065 83 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 RNA5SP425-201ENST00000410336 112 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 Y_RNA.601-201ENST00000410500 113 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 RN7SKP123-201ENST00000410732 291 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 Z98742.3-201ENST00000418637 326 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.81□□□□□ -1.96
NOD1Q9Y239 SNORA74.3-201ENST00000517108 154 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 MIR4529-201ENST00000578110 78 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 MIR4694-201ENST00000578534 80 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 MALAT1.1-201ENST00000618249 95 ntBASIC2.81□□□□□ -1.96
NOD1Q9Y239 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
NOD1Q9Y239 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NOD1Q9Y239 Y_RNA.10-201ENST00000362371 110 ntBASIC2.8□□□□□ -1.96
NOD1Q9Y239 RNU6-616P-201ENST00000384353 107 ntBASIC2.8□□□□□ -1.96
NOD1Q9Y239 MIR605-201ENST00000385078 83 ntBASIC2.8□□□□□ -1.96
NOD1Q9Y239 MIR577-201ENST00000385196 96 ntBASIC2.8□□□□□ -1.96
NOD1Q9Y239 RNU7-193P-201ENST00000516723 65 ntBASIC2.8□□□□□ -1.96
NOD1Q9Y239 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.8□□□□□ -1.96
NOD1Q9Y239 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
NOD1Q9Y239 RNU1-138P-201ENST00000384093 164 ntBASIC2.79□□□□□ -1.96
NOD1Q9Y239 RNU6-360P-201ENST00000390944 104 ntBASIC2.79□□□□□ -1.96
NOD1Q9Y239 SNORA7.5-201ENST00000410672 110 ntBASIC2.79□□□□□ -1.96
NOD1Q9Y239 AL442128.1-201ENST00000615151 90 ntBASIC2.79□□□□□ -1.96
NOD1Q9Y239 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.79□□□□□ -1.96
NOD1Q9Y239 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NOD1Q9Y239 RNU6-832P-201ENST00000363319 107 ntBASIC2.78□□□□□ -1.96
NOD1Q9Y239 SNORA26.2-201ENST00000390922 122 ntBASIC2.78□□□□□ -1.96
NOD1Q9Y239 HMGN1P33-201ENST00000432945 451 ntBASIC2.78□□□□□ -1.96
NOD1Q9Y239 MIR1270-201ENST00000459320 83 ntBASIC2.78□□□□□ -1.96
NOD1Q9Y239 snoU13.16-201ENST00000459350 104 ntBASIC2.78□□□□□ -1.96
NOD1Q9Y239 RNU6-762P-201ENST00000517107 102 ntBASIC2.78□□□□□ -1.96
NOD1Q9Y239 RNU6-844P-201ENST00000517175 102 ntBASIC2.78□□□□□ -1.96
NOD1Q9Y239 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.78□□□□□ -1.96
NOD1Q9Y239 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.78□□□□□ -1.96
NOD1Q9Y239 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
NOD1Q9Y239 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
NOD1Q9Y239 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NOD1Q9Y239 SNORA32-201ENST00000384072 121 ntBASIC2.77□□□□□ -1.97
NOD1Q9Y239 Y_RNA.466-201ENST00000384294 113 ntBASIC2.77□□□□□ -1.97
NOD1Q9Y239 RNA5SP57-201ENST00000459463 123 ntBASIC2.77□□□□□ -1.97
NOD1Q9Y239 AC234781.5-201ENST00000508429 271 ntBASIC2.77□□□□□ -1.97
NOD1Q9Y239 MIR5194-201ENST00000582634 120 ntBASIC2.77□□□□□ -1.97
NOD1Q9Y239 Y_RNA.342-201ENST00000365352 113 ntBASIC2.76□□□□□ -1.97
NOD1Q9Y239 RNU6-679P-201ENST00000391003 106 ntBASIC2.76□□□□□ -1.97
NOD1Q9Y239 RNY4P29-201ENST00000410801 97 ntBASIC2.76□□□□□ -1.97
NOD1Q9Y239 AL353813.1-201ENST00000440700 253 ntBASIC2.76□□□□□ -1.97
NOD1Q9Y239 MIR4524B-201ENST00000581569 115 ntBASIC2.76□□□□□ -1.97
NOD1Q9Y239 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.76□□□□□ -1.97
NOD1Q9Y239 RNU6-1123P-201ENST00000362347 106 ntBASIC2.75□□□□□ -1.97
NOD1Q9Y239 SNORA1.1-201ENST00000364671 133 ntBASIC2.75□□□□□ -1.97
NOD1Q9Y239 RNU6-203P-201ENST00000384038 104 ntBASIC2.75□□□□□ -1.97
NOD1Q9Y239 MIR524-201ENST00000385242 87 ntBASIC2.75□□□□□ -1.97
NOD1Q9Y239 AL359511.1-201ENST00000402970 211 ntBASIC2.75□□□□□ -1.97
NOD1Q9Y239 RNU6-917P-201ENST00000516294 104 ntBASIC2.75□□□□□ -1.97
NOD1Q9Y239 RNU7-43P-201ENST00000516554 64 ntBASIC2.75□□□□□ -1.97
NOD1Q9Y239 MIR4648-201ENST00000580107 72 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 236.9 ms