Protein–RNA interactions for Protein: Q9Y228

TRAF3IP3, TRAF3-interacting JNK-activating modulator, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3Q9Y228 Y_RNA.210-201ENST00000364161 110 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.229-201ENST00000364347 113 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.238-201ENST00000364441 102 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.354-201ENST00000365448 111 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 SNORA36.2-201ENST00000384004 127 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-484P-201ENST00000384016 107 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-211P-201ENST00000384047 107 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 SNORA27-201ENST00000384323 126 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.527-201ENST00000384573 102 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 MIR563-201ENST00000385080 79 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 MIR1287-201ENST00000408492 90 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-602P-201ENST00000411155 105 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 AF228730.3-201ENST00000436691 102 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 MTND5P22-201ENST00000458380 195 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-977P-201ENST00000516411 103 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 SNORA40.15-201ENST00000516884 107 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 AP003733.2-201ENST00000529409 171 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 MIR3612-201ENST00000579753 87 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.802-201ENST00000614892 130 ntBASIC0.37□□□□□ -2.35
TRAF3IP3Q9Y228 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.460-201ENST00000384255 102 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 MIR626-201ENST00000385032 94 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 SNORA53-201ENST00000391141 249 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 MIR548P-201ENST00000408336 84 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-1190P-201ENST00000410811 104 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 MTND4LP11-201ENST00000422184 280 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 AL731563.1-201ENST00000442202 214 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 RPS29P24-201ENST00000486345 171 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 SERF1AP1-201ENST00000514575 187 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 RNY3P15-201ENST00000516297 97 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 MIR3171-201ENST00000584270 74 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 AC022709.1-201ENST00000615967 87 ntBASIC0.36□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.24-201ENST00000362508 103 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.61-201ENST00000362835 102 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 SNORD38B-201ENST00000384690 67 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 MIR18B-201ENST00000454574 71 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 snoU13.2-201ENST00000459201 104 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 RNA5SP220-201ENST00000516298 104 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-1338P-201ENST00000516328 91 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 AC100767.1-201ENST00000528178 123 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 AP001094.1-201ENST00000579805 193 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 SNORA4-201ENST00000584302 138 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 AC008608.1-201ENST00000603910 127 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 SNORD38B-202ENST00000625943 69 ntBASIC0.35□□□□□ -2.35
TRAF3IP3Q9Y228 AC010332.2-201ENST00000613083 1904 ntBASIC0.34□□□□□ -2.35
TRAF3IP3Q9Y228 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.34□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.91-201ENST00000363042 107 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.275-201ENST00000364726 110 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 MIR588-201ENST00000384900 83 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 SNORD100-201ENST00000408573 76 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-1203P-201ENST00000410703 110 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-365P-201ENST00000517113 106 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-1270P-201ENST00000517128 108 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 AC097639.2-201ENST00000603159 172 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 AL078603.1-201ENST00000603824 313 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 MIR376A2-201ENST00000636782 80 ntBASIC0.34□□□□□ -2.36
TRAF3IP3Q9Y228 MIRLET7D-201ENST00000362263 87 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 MIR30D-201ENST00000362283 70 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.116-201ENST00000363292 103 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 SNORA63C-201ENST00000364578 129 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.634-201ENST00000364811 113 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.440-201ENST00000384120 114 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-514P-201ENST00000384208 107 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-1289P-201ENST00000384431 106 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 SNORA8.3-201ENST00000384679 139 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 SNORA26.6-201ENST00000391256 115 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-1165P-201ENST00000410119 107 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 RNU2-55P-201ENST00000411146 174 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 SNRPGP8-201ENST00000454064 226 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 SNORD2.1-201ENST00000458762 69 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-1132P-201ENST00000459214 107 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-998P-201ENST00000515894 101 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-1143P-201ENST00000516125 104 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-504P-201ENST00000516568 104 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 RNU7-53P-201ENST00000516705 60 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 AC090897.1-201ENST00000580909 226 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.33□□□□□ -2.36
TRAF3IP3Q9Y228 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.117-201ENST00000363294 101 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 Y_RNA.152-201ENST00000363578 100 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 RNU4-45P-201ENST00000365469 141 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-342P-201ENST00000384521 104 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 MIR125B2-201ENST00000385128 89 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 SNORD12C-201ENST00000386307 89 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 MT-TT-201ENST00000387460 66 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 MIR938-201ENST00000401216 83 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-651P-201ENST00000411040 105 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 MTCYBP6-201ENST00000441810 138 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 RNA5SP436-201ENST00000516020 115 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 RNU6-126P-201ENST00000516685 103 ntBASIC0.32□□□□□ -2.36
TRAF3IP3Q9Y228 SNORD92-201ENST00000585078 85 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 228.4 ms