Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC015818.7-201ENST00000428754 109 ntBASIC0.37□□□□□ -2.35
CDH9Q9ULB4 AC087499.7-201ENST00000441958 109 ntBASIC0.37□□□□□ -2.35
CDH9Q9ULB4 RNU6-1338P-201ENST00000516328 91 ntBASIC0.37□□□□□ -2.35
CDH9Q9ULB4 SNORA18.4-201ENST00000516440 124 ntBASIC0.37□□□□□ -2.35
CDH9Q9ULB4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.37□□□□□ -2.35
CDH9Q9ULB4 AP000942.4-201ENST00000604811 241 ntBASIC0.37□□□□□ -2.35
CDH9Q9ULB4 SNORD115-40-201ENST00000606510 82 ntBASIC0.37□□□□□ -2.35
CDH9Q9ULB4 AP001282.2-201ENST00000616149 309 ntBASIC0.37□□□□□ -2.35
CDH9Q9ULB4 Y_RNA.37-201ENST00000362606 108 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 RNU6-888P-201ENST00000363010 101 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 Y_RNA.229-201ENST00000364347 113 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 Y_RNA.275-201ENST00000364726 110 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 RNU6-211P-201ENST00000384047 107 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 MIR626-201ENST00000385032 94 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 RNU6-205P-201ENST00000390858 107 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 SNORD83.1-201ENST00000411362 77 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 snoU13.16-201ENST00000459350 104 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 SERF1AP1-201ENST00000514575 187 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 RNY3P15-201ENST00000516297 97 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 SNORD36C-201ENST00000516733 66 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 AC100767.1-201ENST00000528178 123 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 MIR4724-201ENST00000579485 89 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 AC020891.4-201ENST00000605745 93 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 MIR6740-201ENST00000618268 113 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.36□□□□□ -2.35
CDH9Q9ULB4 MIR376A2-201ENST00000636782 80 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 Z97988.1-201ENST00000637697 135 ntBASIC0.36□□□□□ -2.35
CDH9Q9ULB4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.36□□□□□ -2.35
CDH9Q9ULB4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CDH9Q9ULB4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.35□□□□□ -2.35
CDH9Q9ULB4 SNORA25.1-201ENST00000362326 128 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 Y_RNA.117-201ENST00000363294 101 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 SNORD115-28-201ENST00000363931 81 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 snoU2_19.4-201ENST00000364329 80 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 Y_RNA.242-201ENST00000364473 110 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 SNORA33.2-201ENST00000365413 134 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 SNORD24-201ENST00000383884 75 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 RNY1P4-201ENST00000384595 115 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 RNU6-985P-201ENST00000410182 104 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 Y_RNA.604-201ENST00000410574 102 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 RNU6-1190P-201ENST00000410811 104 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 AF228730.3-201ENST00000436691 102 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 AL731563.1-201ENST00000442202 214 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 AC087499.4-201ENST00000448505 178 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 RNU7-73P-201ENST00000458743 63 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 SNORD2.1-201ENST00000458762 69 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 SCARNA8-201ENST00000515924 131 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 RNU6-1007P-201ENST00000516586 107 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 Y_RNA.701-201ENST00000516812 110 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 SNORA40.15-201ENST00000516884 107 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.35□□□□□ -2.35
CDH9Q9ULB4 MIR5688-201ENST00000580619 83 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 MIR4264-201ENST00000583520 66 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 AC010487.4-201ENST00000637027 61 ntBASIC0.35□□□□□ -2.35
CDH9Q9ULB4 MIR367-201ENST00000362299 68 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.24-201ENST00000362508 103 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.91-201ENST00000363042 107 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.152-201ENST00000363578 100 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.241-201ENST00000364470 117 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.293-201ENST00000364908 93 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 RNU6-1289P-201ENST00000384431 106 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.518-201ENST00000384552 113 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 MIR563-201ENST00000385080 79 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 SNORA40.5-201ENST00000391061 128 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 HMGN1P33-201ENST00000432945 451 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
CDH9Q9ULB4 MTND4LP30-201ENST00000454092 297 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 MIR4804-201ENST00000581683 73 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 AC097639.2-201ENST00000603159 172 ntBASIC0.34□□□□□ -2.36
CDH9Q9ULB4 RNU6-740P-201ENST00000364734 105 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.512-201ENST00000384518 102 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 MIR520H-201ENST00000385126 88 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 MT-TT-201ENST00000387460 66 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 SNORA53-201ENST00000391141 249 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 RNU6-1109P-201ENST00000391187 107 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 RNU6-602P-201ENST00000411155 105 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 SNRPGP8-201ENST00000454064 226 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 RNU7-56P-201ENST00000458744 62 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.33□□□□□ -2.36
CDH9Q9ULB4 RNU6-693P-201ENST00000516134 107 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 RNU6-1153P-201ENST00000516760 105 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 RNU6-453P-201ENST00000516819 85 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 RNU6-958P-201ENST00000516995 106 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 AP000753.3-201ENST00000604083 169 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.802-201ENST00000614892 130 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 AC134878.1-201ENST00000619901 243 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.33□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.14-201ENST00000362415 103 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.36-201ENST00000362602 112 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.82-201ENST00000363000 102 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.92-201ENST00000363043 102 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 RNU6-797P-201ENST00000363101 109 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.235-201ENST00000364412 102 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.306-201ENST00000365015 102 ntBASIC0.32□□□□□ -2.36
CDH9Q9ULB4 Y_RNA.312-201ENST00000365089 102 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms