Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU2-11P-201ENST00000459191 187 ntBASIC1.99□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-412P-201ENST00000516434 106 ntBASIC1.99□□□□□ -2.09
CDC42EP3Q9UKI2 RNA5SP281-201ENST00000516504 135 ntBASIC1.99□□□□□ -2.09
CDC42EP3Q9UKI2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.99□□□□□ -2.09
CDC42EP3Q9UKI2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.99□□□□□ -2.09
CDC42EP3Q9UKI2 ICE2P2-201ENST00000483823 2787 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 MIR342-201ENST00000362212 99 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 Y_RNA.85-201ENST00000363014 111 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 RNY4P6-201ENST00000363667 96 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 Y_RNA.213-201ENST00000364178 111 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 SNORA70.7-201ENST00000384159 133 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-1104P-201ENST00000384723 104 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-1319P-201ENST00000390855 104 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-747P-201ENST00000390928 104 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 SNORD28B-201ENST00000390993 75 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-241P-201ENST00000391148 104 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 RNA5SP144-201ENST00000410846 116 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-177P-201ENST00000411257 104 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 SNX2P2-201ENST00000424553 323 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 RPS29P29-201ENST00000456396 171 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 AC103810.6-201ENST00000606708 136 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 AC021613.1-201ENST00000623880 111 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 AC008555.8-201ENST00000623602 2168 ntBASIC1.98□□□□□ -2.09
CDC42EP3Q9UKI2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 MIR302B-201ENST00000362188 73 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 RNA5SP456-201ENST00000364002 114 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-147P-201ENST00000383983 107 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 AC004965.1-201ENST00000413033 213 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 SNORA74.3-201ENST00000517108 154 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 AC022254.1-201ENST00000567857 235 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 MIR3613-201ENST00000579844 87 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 AC009831.4-201ENST00000620744 325 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 MIR1291-201ENST00000627649 87 ntBASIC1.97□□□□□ -2.09
CDC42EP3Q9UKI2 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.537-201ENST00000384626 109 ntBASIC1.96□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.549-201ENST00000384657 102 ntBASIC1.96□□□□□ -2.1
CDC42EP3Q9UKI2 MIR653-201ENST00000385279 96 ntBASIC1.96□□□□□ -2.1
CDC42EP3Q9UKI2 POLR2J4-204ENST00000418424 324 ntBASIC1.96□□□□□ -2.1
CDC42EP3Q9UKI2 RNU7-73P-201ENST00000458743 63 ntBASIC1.96□□□□□ -2.1
CDC42EP3Q9UKI2 RNU7-53P-201ENST00000516705 60 ntBASIC1.96□□□□□ -2.1
CDC42EP3Q9UKI2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.96□□□□□ -2.1
CDC42EP3Q9UKI2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDC42EP3Q9UKI2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 AL596028.1-201ENST00000326971 197 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 RNU4-16P-201ENST00000364737 141 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-1107P-201ENST00000364817 104 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-106P-201ENST00000384405 107 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 SNORD12C-201ENST00000386307 89 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 MIR759-201ENST00000390224 91 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 SNORA26.6-201ENST00000391256 115 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 AC108729.3-201ENST00000513484 108 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-917P-201ENST00000516294 104 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 AC022523.2-201ENST00000561045 150 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 FAM106DP-201ENST00000586416 501 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-94P-201ENST00000607728 107 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 MIR7111-201ENST00000619751 72 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 AL035470.1-201ENST00000622571 220 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 MIR6841-201ENST00000637129 72 ntBASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.323-201ENST00000365157 109 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.430-201ENST00000384081 110 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 HMGN2P23-201ENST00000456759 269 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-958P-201ENST00000516995 106 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 MIR4791-201ENST00000607666 84 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 AC046143.2-201ENST00000609789 160 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 MIR6840-201ENST00000611937 71 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 AC243994.1-201ENST00000618627 109 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 AC095038.3-201ENST00000634439 195 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 AC016717.2-201ENST00000609089 5141 ntBASIC1.94□□□□□ -2.1
CDC42EP3Q9UKI2 MIRLET7G-201ENST00000362280 84 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 SNORD115-2-201ENST00000362842 82 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 Y_RNA.116-201ENST00000363292 103 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 SNORD115-20-201ENST00000365099 82 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 SNORA6-201ENST00000384033 151 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 JTBP1-201ENST00000441314 247 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 RPL23AP6-201ENST00000446637 472 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-893P-201ENST00000458841 100 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 RNU7-67P-201ENST00000459003 62 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 RNA5SP57-201ENST00000459463 123 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 AC079804.2-201ENST00000490376 200 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 AC026436.1-201ENST00000510537 270 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 RNU7-43P-201ENST00000516554 64 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 AC004812.1-201ENST00000540773 146 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 MIR3163-201ENST00000581592 73 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 AL020996.3-201ENST00000606617 222 ntBASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDC42EP3Q9UKI2 RNU6-661P-201ENST00000362409 107 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms