Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MIR624-201ENST00000385217 97 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 RNA5SP127-201ENST00000411051 133 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 SNX2P2-201ENST00000424553 323 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 RNA5SP445-201ENST00000515889 115 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 RNU7-200P-201ENST00000516105 62 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 SNORA18.4-201ENST00000516440 124 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.33□□□□□ -2.2
SIX4Q9UIU6 MIR3646-201ENST00000578301 84 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.33□□□□□ -2.2
SIX4Q9UIU6 MTND1P7-201ENST00000632801 297 ntBASIC1.33□□□□□ -2.2
SIX4Q9UIU6 RNU6-774P-201ENST00000363238 107 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.241-201ENST00000364470 117 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 RNU6-1292P-201ENST00000383856 107 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 RNU6-1189P-201ENST00000383958 107 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.506-201ENST00000384494 102 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 AC087499.4-201ENST00000448505 178 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 RNU6-1053P-201ENST00000515930 101 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 RNU6-346P-201ENST00000516288 111 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 MIR5197-201ENST00000583721 112 ntBASIC1.32□□□□□ -2.2
SIX4Q9UIU6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.32□□□□□ -2.2
SIX4Q9UIU6 SNORD115-34-201ENST00000362441 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-12-201ENST00000362583 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-29-201ENST00000362834 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-9-201ENST00000362912 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-21-201ENST00000362963 81 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-14-201ENST00000363090 81 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-13-201ENST00000363358 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-41-201ENST00000363608 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-11-201ENST00000363616 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-5-201ENST00000363633 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-39-201ENST00000363694 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-4-201ENST00000363810 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-16-201ENST00000363887 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-6-201ENST00000363942 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-42-201ENST00000364273 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-15-201ENST00000364809 81 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-1-201ENST00000364961 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-26-201ENST00000365067 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-10-201ENST00000365073 81 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 RNU6-53P-201ENST00000365367 106 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-43-201ENST00000365503 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-36-201ENST00000365629 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.410-201ENST00000383992 113 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.440-201ENST00000384120 114 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.31□□□□□ -2.2
SIX4Q9UIU6 RPS26P48-201ENST00000491713 339 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 AC112693.2-201ENST00000556538 232 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 MIR4764-201ENST00000580680 88 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 SNORD115-40-201ENST00000606510 82 ntBASIC1.31□□□□□ -2.2
SIX4Q9UIU6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.31□□□□□ -2.2
SIX4Q9UIU6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.52-201ENST00000362760 96 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 SNORD33-201ENST00000362761 85 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 RNU6-392P-201ENST00000364926 101 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.370-201ENST00000365589 108 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.400-201ENST00000383963 111 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.497-201ENST00000384447 98 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 RNU6-125P-201ENST00000384505 107 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 MIR520C-201ENST00000385005 87 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.3□□□□□ -2.2
SIX4Q9UIU6 RNU7-41P-201ENST00000515917 61 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 SNORA25.12-201ENST00000516202 82 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 RNU7-43P-201ENST00000516554 64 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 AL512310.8-201ENST00000550183 120 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 MIR3192-201ENST00000584920 77 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 AL096861.1-201ENST00000610899 123 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 GHRLOS.1-201ENST00000610995 70 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 AC008133.2-201ENST00000624540 351 ntBASIC1.3□□□□□ -2.2
SIX4Q9UIU6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.3□□□□□ -2.2
SIX4Q9UIU6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.215-201ENST00000364204 112 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 Y_RNA.251-201ENST00000364551 99 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 SNORA1.2-201ENST00000365189 134 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 SNORA27-201ENST00000384323 126 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 MIR569-201ENST00000385228 96 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 SNORA40.5-201ENST00000391061 128 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 SUMO1P3-201ENST00000439961 304 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 RNU7-197P-201ENST00000458836 62 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 RNU6-1149P-201ENST00000516810 97 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 MIR3664-201ENST00000579074 99 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 MIR3133-201ENST00000583157 78 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 MTND5P32-201ENST00000560711 1802 ntBASIC1.29□□□□□ -2.2
SIX4Q9UIU6 RNY1P5-201ENST00000383890 115 ntBASIC1.28□□□□□ -2.2
SIX4Q9UIU6 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
SIX4Q9UIU6 RNU6-460P-201ENST00000391158 108 ntBASIC1.28□□□□□ -2.2
SIX4Q9UIU6 snoU13.25-201ENST00000458945 104 ntBASIC1.28□□□□□ -2.2
SIX4Q9UIU6 TRMT112P2-201ENST00000512910 132 ntBASIC1.28□□□□□ -2.2
SIX4Q9UIU6 RNU2-13P-201ENST00000515909 113 ntBASIC1.28□□□□□ -2.2
SIX4Q9UIU6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.28□□□□□ -2.2
SIX4Q9UIU6 RNA5SP272-201ENST00000516095 111 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms