Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC096949.1-201ENST00000412047 152 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 BTF3P11-201ENST00000426582 477 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 AC236972.2-201ENST00000434979 310 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 MTND5P20-201ENST00000448677 143 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 SNRPGP12-201ENST00000449481 213 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 SEPT14P8-201ENST00000508026 178 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.691-201ENST00000516611 103 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 AL662814.1-201ENST00000617364 121 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 AL162376.1-201ENST00000624117 175 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 AC099654.14-201ENST00000638599 341 ntBASIC0.07□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.37-201ENST00000362606 108 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 RNU6-1309P-201ENST00000363305 108 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 SNORD14E-201ENST00000364009 85 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 SNORA1.1-201ENST00000364671 133 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 RNU6-702P-201ENST00000364982 107 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 MIR643-201ENST00000385267 97 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 RNU2-55P-201ENST00000411146 174 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.06□□□□□ -2.4
CCDC88CQ9P219 RPS29P24-201ENST00000486345 171 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 SCARNA24.2-201ENST00000516968 130 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.06□□□□□ -2.4
CCDC88CQ9P219 AL355297.3-201ENST00000604082 446 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.06□□□□□ -2.4
CCDC88CQ9P219 AC134878.1-201ENST00000619901 243 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 snoU2_19.2-201ENST00000363024 80 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 RNU6-726P-201ENST00000364680 107 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.547-201ENST00000384654 119 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 SNORA53-201ENST00000391141 249 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 RNU6-1270P-201ENST00000517128 108 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 AL021707.8-201ENST00000609428 183 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 AL008718.3-201ENST00000610217 321 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 Z97988.1-201ENST00000637697 135 ntBASIC0.06□□□□□ -2.4
CCDC88CQ9P219 SNORD115-34-201ENST00000362441 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-12-201ENST00000362583 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-29-201ENST00000362834 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-9-201ENST00000362912 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-21-201ENST00000362963 81 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-14-201ENST00000363090 81 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-13-201ENST00000363358 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-41-201ENST00000363608 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-11-201ENST00000363616 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-5-201ENST00000363633 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-39-201ENST00000363694 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-4-201ENST00000363810 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-16-201ENST00000363887 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-6-201ENST00000363942 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-42-201ENST00000364273 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-15-201ENST00000364809 81 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-1-201ENST00000364961 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-26-201ENST00000365067 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-10-201ENST00000365073 81 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-43-201ENST00000365503 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-36-201ENST00000365629 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.439-201ENST00000384119 94 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.445-201ENST00000384168 102 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.486-201ENST00000384398 107 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 RNU6-876P-201ENST00000391295 104 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 MTND4P19-201ENST00000446659 478 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 AC023449.1-201ENST00000454464 154 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 RNU6-365P-201ENST00000517113 106 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 AP003733.2-201ENST00000529409 171 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 AC141557.1-201ENST00000540982 400 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 AC087685.1-201ENST00000587507 141 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 AC020891.4-201ENST00000605745 93 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 SNORD115-40-201ENST00000606510 82 ntBASIC0.05□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.229-201ENST00000364347 113 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RNA5SP517-201ENST00000364724 117 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 SNORD42.2-201ENST00000365570 69 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RNU6-1319P-201ENST00000390855 104 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RNU6-747P-201ENST00000390928 104 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RNU6-241P-201ENST00000391148 104 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 SNORD93-201ENST00000408813 74 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 MIR548H2-201ENST00000408874 88 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 SNORA40.8-201ENST00000411034 126 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.04□□□□□ -2.4
CCDC88CQ9P219 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RPL39P25-201ENST00000449384 154 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RNU2-60P-201ENST00000517290 128 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 AC131281.1-201ENST00000522984 164 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 MIR3612-201ENST00000579753 87 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 MIR3152-201ENST00000579801 74 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.772-201ENST00000606692 102 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 U6atac.1-201ENST00000616025 117 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 AL138825.1-201ENST00000618587 192 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 AC015726.2-201ENST00000620112 122 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.380-201ENST00000365663 111 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RNU6-1248P-201ENST00000391096 64 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 RNU6-651P-201ENST00000411040 105 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 SEPT7P4-201ENST00000437076 306 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 MTND5P22-201ENST00000458380 195 ntBASIC0.04□□□□□ -2.4
CCDC88CQ9P219 Y_RNA.660-201ENST00000516002 120 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms