Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 SNORA26-201ENST00000391286 122 ntBASIC0.9□□□□□ -2.27
HACD3Q9P035 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.9□□□□□ -2.27
HACD3Q9P035 RNU6-1023P-201ENST00000516137 106 ntBASIC0.9□□□□□ -2.27
HACD3Q9P035 RNU6-113P-201ENST00000516653 101 ntBASIC0.9□□□□□ -2.27
HACD3Q9P035 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
HACD3Q9P035 MIR3149-201ENST00000584629 83 ntBASIC0.9□□□□□ -2.27
HACD3Q9P035 AL162730.1-201ENST00000605734 292 ntBASIC0.9□□□□□ -2.27
HACD3Q9P035 SNORD115-40-201ENST00000606510 82 ntBASIC0.9□□□□□ -2.27
HACD3Q9P035 7SK.10-201ENST00000621414 298 ntBASIC0.9□□□□□ -2.27
HACD3Q9P035 MIR6516-201ENST00000630554 81 ntBASIC0.9□□□□□ -2.27
HACD3Q9P035 Y_RNA.60-201ENST00000362831 98 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 RNU6-654P-201ENST00000364373 107 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 Y_RNA.307-201ENST00000365022 117 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 Y_RNA.308-201ENST00000365043 101 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 Y_RNA.447-201ENST00000384184 113 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 Y_RNA.626-201ENST00000411288 95 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 AF228730.3-201ENST00000436691 102 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 AC107297.1-201ENST00000459991 176 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 SNORA18.4-201ENST00000516440 124 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 SNORD36C-201ENST00000516733 66 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 AP003484.1-201ENST00000530974 250 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 MIR4781-201ENST00000585250 76 ntBASIC0.89□□□□□ -2.27
HACD3Q9P035 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
HACD3Q9P035 Y_RNA.23-201ENST00000362496 106 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 Y_RNA.144-201ENST00000363521 113 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 RNU6-103P-201ENST00000363686 107 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 SNORA40.5-201ENST00000391061 128 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 POLR2J4-204ENST00000418424 324 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 RNU6-197P-201ENST00000516680 100 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 RNA5SP102-201ENST00000516865 106 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 AC036111.3-201ENST00000526389 112 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 AC023827.1-201ENST00000569247 97 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 AC131055.1-201ENST00000584626 316 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 AP000942.4-201ENST00000604811 241 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 AC134878.1-201ENST00000619901 243 ntBASIC0.88□□□□□ -2.27
HACD3Q9P035 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
HACD3Q9P035 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
HACD3Q9P035 RNU6-728P-201ENST00000365375 104 ntBASIC0.87□□□□□ -2.27
HACD3Q9P035 MIR200A-201ENST00000384875 90 ntBASIC0.87□□□□□ -2.27
HACD3Q9P035 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
HACD3Q9P035 RNU6-493P-201ENST00000391321 108 ntBASIC0.87□□□□□ -2.27
HACD3Q9P035 RNU6-613P-201ENST00000410412 108 ntBASIC0.87□□□□□ -2.27
HACD3Q9P035 RNU4-43P-201ENST00000410628 137 ntBASIC0.87□□□□□ -2.27
HACD3Q9P035 RNU7-67P-201ENST00000459003 62 ntBASIC0.87□□□□□ -2.27
HACD3Q9P035 RNU6-111P-201ENST00000517179 105 ntBASIC0.87□□□□□ -2.27
HACD3Q9P035 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.87□□□□□ -2.27
HACD3Q9P035 SNORA20.1-201ENST00000364790 130 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 SNORD114-24-201ENST00000365029 72 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 SNORA1-201ENST00000384107 130 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 SNORA27-201ENST00000384323 126 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 snoU13.16-201ENST00000459350 104 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 RNU4-71P-201ENST00000516258 113 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 MIR2115-201ENST00000516657 100 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.86□□□□□ -2.27
HACD3Q9P035 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 MIR4308-201ENST00000580634 81 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 MIR4744-201ENST00000581563 82 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 AC013244.2-201ENST00000603396 103 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 FAM71BP1-201ENST00000604431 523 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 RNU2-4P-201ENST00000606190 192 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 AC106800.4-201ENST00000614905 153 ntBASIC0.86□□□□□ -2.27
HACD3Q9P035 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
HACD3Q9P035 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 RNY1-201ENST00000364228 113 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 Y_RNA.238-201ENST00000364441 102 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 RNU6-923P-201ENST00000364753 107 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 RNU1-36P-201ENST00000365130 165 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 RNU6-396P-201ENST00000365369 105 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 Y_RNA.410-201ENST00000383992 113 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 RNU6-578P-201ENST00000390980 103 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 SNORD77.3-201ENST00000391113 65 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 RNA5SP95-201ENST00000410319 137 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 AC090844.1-201ENST00000422019 156 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 RPS29P24-201ENST00000486345 171 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 RNU6-958P-201ENST00000516995 106 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
HACD3Q9P035 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 AC108706.1-201ENST00000611053 297 ntBASIC0.85□□□□□ -2.27
HACD3Q9P035 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
HACD3Q9P035 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
HACD3Q9P035 Y_RNA.7-201ENST00000362352 102 ntBASIC0.84□□□□□ -2.27
HACD3Q9P035 Y_RNA.440-201ENST00000384120 114 ntBASIC0.84□□□□□ -2.27
HACD3Q9P035 RNU6-125P-201ENST00000384505 107 ntBASIC0.84□□□□□ -2.27
HACD3Q9P035 RNU6-913P-201ENST00000390913 95 ntBASIC0.84□□□□□ -2.27
HACD3Q9P035 MIR942-201ENST00000401111 86 ntBASIC0.84□□□□□ -2.27
HACD3Q9P035 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.84□□□□□ -2.27
HACD3Q9P035 RNU7-73P-201ENST00000458743 63 ntBASIC0.84□□□□□ -2.27
HACD3Q9P035 AC004817.2-201ENST00000561794 651 ntBASIC0.84□□□□□ -2.27
HACD3Q9P035 MIR376A2-201ENST00000636782 80 ntBASIC0.84□□□□□ -2.27
HACD3Q9P035 Y_RNA.121-201ENST00000363309 113 ntBASIC0.83□□□□□ -2.28
HACD3Q9P035 SNORD113.3-201ENST00000364630 78 ntBASIC0.83□□□□□ -2.28
HACD3Q9P035 RNU6-1189P-201ENST00000383958 107 ntBASIC0.83□□□□□ -2.28
HACD3Q9P035 SNORD111-201ENST00000408139 94 ntBASIC0.83□□□□□ -2.28
HACD3Q9P035 AL121914.1-201ENST00000450188 156 ntBASIC0.83□□□□□ -2.28
HACD3Q9P035 PDCD5P2-201ENST00000507570 312 ntBASIC0.83□□□□□ -2.28
HACD3Q9P035 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
HACD3Q9P035 RNU6-94P-201ENST00000607728 107 ntBASIC0.83□□□□□ -2.28
HACD3Q9P035 MIR8055-201ENST00000610739 97 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 261.9 ms