Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 MIR1323-201ENST00000408090 73 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 RNU6-1135P-201ENST00000411083 103 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 AL591806.2-201ENST00000433122 173 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 RNU7-90P-201ENST00000459216 62 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 AC005840.1-201ENST00000498412 377 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 RNU2-13P-201ENST00000515909 113 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 AC090821.2-201ENST00000523552 176 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 AC098479.1-201ENST00000609225 154 ntBASIC1.53□□□□□ -2.16
DDX56Q9NY93 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.53□□□□□ -2.16
DDX56Q9NY93 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
DDX56Q9NY93 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
DDX56Q9NY93 SNORA25.3-201ENST00000363205 127 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 SNORA25.7-201ENST00000364375 127 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 RNU6-1292P-201ENST00000383856 107 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 Y_RNA.393-201ENST00000383936 102 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 SNORA27-201ENST00000384323 126 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 PCNPP3-201ENST00000393579 471 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 MRPL35P3-201ENST00000421557 364 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 AC063976.4-201ENST00000421971 163 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.52□□□□□ -2.17
DDX56Q9NY93 RNU7-67P-201ENST00000459003 62 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 RNU7-121P-201ENST00000516604 62 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 MIR4524B-201ENST00000581569 115 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 AC104465.1-201ENST00000611365 139 ntBASIC1.52□□□□□ -2.17
DDX56Q9NY93 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
DDX56Q9NY93 RNU6-597P-201ENST00000365620 102 ntBASIC1.51□□□□□ -2.17
DDX56Q9NY93 Y_RNA.440-201ENST00000384120 114 ntBASIC1.51□□□□□ -2.17
DDX56Q9NY93 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
DDX56Q9NY93 AL354695.1-201ENST00000427935 228 ntBASIC1.51□□□□□ -2.17
DDX56Q9NY93 RPS29P29-201ENST00000456396 171 ntBASIC1.51□□□□□ -2.17
DDX56Q9NY93 AC108210.2-201ENST00000503681 201 ntBASIC1.51□□□□□ -2.17
DDX56Q9NY93 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.51□□□□□ -2.17
DDX56Q9NY93 AP003716.2-201ENST00000528260 108 ntBASIC1.51□□□□□ -2.17
DDX56Q9NY93 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
DDX56Q9NY93 U8.1-201ENST00000362843 134 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 RNU6-1082P-201ENST00000364574 107 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 Y_RNA.272-201ENST00000364696 102 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 AC009474.2-201ENST00000451383 136 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 snoU13.16-201ENST00000459350 104 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 RNU7-21P-201ENST00000459430 62 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.5□□□□□ -2.17
DDX56Q9NY93 RNU7-53P-201ENST00000516705 60 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 RNU6-958P-201ENST00000516995 106 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 RNA5SP404-201ENST00000517118 132 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 SEPT14P17-201ENST00000617978 177 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 MTND1P7-201ENST00000632801 297 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 MIR3658-201ENST00000636291 56 ntBASIC1.5□□□□□ -2.17
DDX56Q9NY93 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
DDX56Q9NY93 Y_RNA.363-201ENST00000365529 113 ntBASIC1.49□□□□□ -2.17
DDX56Q9NY93 SNORA67.5-201ENST00000391036 107 ntBASIC1.49□□□□□ -2.17
DDX56Q9NY93 RNA5SP127-201ENST00000411051 133 ntBASIC1.49□□□□□ -2.17
DDX56Q9NY93 SNORD13-201ENST00000459299 104 ntBASIC1.49□□□□□ -2.17
DDX56Q9NY93 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.49□□□□□ -2.17
DDX56Q9NY93 AC015712.3-201ENST00000559380 164 ntBASIC1.49□□□□□ -2.17
DDX56Q9NY93 MIR6844-201ENST00000637122 62 ntBASIC1.49□□□□□ -2.17
DDX56Q9NY93 MIR342-201ENST00000362212 99 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 RNU1-124P-201ENST00000363861 145 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 Y_RNA.555-201ENST00000384673 110 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 MIR624-201ENST00000385217 97 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 RNU6-588P-201ENST00000410281 105 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 RNU6-394P-201ENST00000410735 107 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 RPS29P24-201ENST00000486345 171 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 MIR2115-201ENST00000516657 100 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX56Q9NY93 MIR3124-201ENST00000582636 67 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 MIR5197-201ENST00000583721 112 ntBASIC1.48□□□□□ -2.17
DDX56Q9NY93 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
DDX56Q9NY93 AC008163.1-202ENST00000636004 2889 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 Y_RNA.330-201ENST00000365230 109 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 RNU6-396P-201ENST00000365369 105 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 Y_RNA.351-201ENST00000365436 96 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 SNORA24-201ENST00000384096 131 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 RNU6-804P-201ENST00000384286 107 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 MIR19B1-201ENST00000384829 87 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 SNORA75.2-201ENST00000391138 150 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 SNORA75.3-201ENST00000391231 150 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 MIR1185-1-201ENST00000408598 86 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 MIR548AO-201ENST00000579992 96 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 DNAJC19P2-201ENST00000593340 302 ntBASIC1.47□□□□□ -2.17
DDX56Q9NY93 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
DDX56Q9NY93 Y_RNA.8-201ENST00000362353 102 ntBASIC1.46□□□□□ -2.18
DDX56Q9NY93 MT-TR-201ENST00000387439 65 ntBASIC1.46□□□□□ -2.18
DDX56Q9NY93 RNU6-482P-201ENST00000391068 107 ntBASIC1.46□□□□□ -2.18
DDX56Q9NY93 AC002429.1-201ENST00000437672 148 ntBASIC1.46□□□□□ -2.18
DDX56Q9NY93 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
DDX56Q9NY93 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
DDX56Q9NY93 RNU6-818P-201ENST00000364837 108 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 RNU6-1130P-201ENST00000365434 107 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 MIR200A-201ENST00000384875 90 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 MIR764-201ENST00000390811 85 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 SNORD37.2-201ENST00000391075 66 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 AL035398.1-201ENST00000430869 322 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 RNU7-96P-201ENST00000459535 64 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 RNU6-237P-201ENST00000515985 71 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.45□□□□□ -2.18
DDX56Q9NY93 MIR3144-201ENST00000579460 79 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
DDX56Q9NY93 RNU6-913P-201ENST00000390913 95 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 222.7 ms