Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC015540.1-201ENST00000615828 501 ntBASIC-0.67□□□□□ -2.52
CDC42SE1Q9NRR8 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-899P-201ENST00000363947 107 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-865P-201ENST00000364772 107 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 U8.6-201ENST00000364939 135 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 SNORD110-201ENST00000408189 75 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 RNU7-169P-201ENST00000459456 61 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 RNU7-4P-201ENST00000516961 62 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 AC144568.1-201ENST00000520139 137 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 MIR4760-201ENST00000585040 80 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 AC011373.1-201ENST00000607270 237 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 AC063944.3-201ENST00000609969 533 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 PISRT1.1-201ENST00000616930 107 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 MIR376A2-201ENST00000636782 80 ntBASIC-0.68□□□□□ -2.52
CDC42SE1Q9NRR8 MIR330-201ENST00000362196 94 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 MIR342-201ENST00000362212 99 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 RNU4-80P-201ENST00000363200 141 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 MIR516B1-201ENST00000385211 90 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 AC006210.1-201ENST00000424882 111 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 RNA5SP484-201ENST00000458857 111 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 AC100767.1-201ENST00000528178 123 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 U2.1-201ENST00000618978 145 ntBASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.69□□□□□ -2.52
CDC42SE1Q9NRR8 SNORD114-14-201ENST00000362723 75 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 RNU4-58P-201ENST00000363192 141 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 RNY4P14-201ENST00000363656 96 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 RPS29P8-201ENST00000445109 171 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 AC107399.1-201ENST00000451226 265 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-397P-201ENST00000516226 104 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 AP003733.2-201ENST00000529409 171 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 MIR4645-201ENST00000583158 77 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 AL669831.3-213ENST00000636676 183 ntBASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.7□□□□□ -2.52
CDC42SE1Q9NRR8 MIR302B-201ENST00000362188 73 ntBASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 RNU4-84P-201ENST00000364200 139 ntBASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 SNORA18-201ENST00000384416 132 ntBASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 MTCO2P24-201ENST00000515611 426 ntBASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 RNU7-110P-201ENST00000516891 62 ntBASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-365P-201ENST00000517113 106 ntBASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 AL356055.1-201ENST00000602528 446 ntBASIC-0.71□□□□□ -2.52
CDC42SE1Q9NRR8 RNA5SP133-201ENST00000363368 119 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-763P-201ENST00000390865 106 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 RNU2-16P-201ENST00000410712 136 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 AC092989.1-201ENST00000481235 277 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-191P-201ENST00000516295 94 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-506P-201ENST00000516553 94 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 RNU6-126P-201ENST00000516685 103 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 AC091932.4-201ENST00000623386 200 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 MIR3974-201ENST00000637126 96 ntBASIC-0.72□□□□□ -2.52
CDC42SE1Q9NRR8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 Y_RNA.338-201ENST00000365320 114 ntBASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 SNORD63-201ENST00000384262 68 ntBASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 RNA5SP220-201ENST00000516298 104 ntBASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 DEFB131E-201ENST00000532329 154 ntBASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 MIR4436A-201ENST00000585278 85 ntBASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 AC105081.1-201ENST00000617727 106 ntBASIC-0.73□□□□□ -2.53
CDC42SE1Q9NRR8 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 SNORA22.1-201ENST00000362701 134 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 RNU6-509P-201ENST00000363519 107 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 MIR329-2-201ENST00000385029 84 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 RNU4-14P-201ENST00000410858 122 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 MTND3P8-201ENST00000412909 339 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 MTND1P34-201ENST00000438556 671 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 RNU6-314P-201ENST00000516574 104 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 RNU6-264P-201ENST00000517134 104 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 RNA5SP66-201ENST00000517178 101 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 MIR3908-201ENST00000579798 126 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 AC013791.1-201ENST00000616619 62 ntBASIC-0.74□□□□□ -2.53
CDC42SE1Q9NRR8 RNU6-490P-201ENST00000362985 107 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms