Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PDLIM7Q9NR12 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 RNU6-1014P-201ENST00000383940 103 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 MIR520A-201ENST00000384862 85 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 MIR516B2-201ENST00000385190 85 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 RNA5SP212-201ENST00000391223 107 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 MIR1267-201ENST00000408723 78 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 RNA5SP501-201ENST00000410990 112 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 AC093850.1-201ENST00000454121 251 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 RPL39P34-201ENST00000477141 156 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 RPL23AP63-201ENST00000498752 471 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.677-201ENST00000516401 85 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 RNU6-537P-201ENST00000517277 103 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 AC090821.2-201ENST00000523552 176 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 SUB1P4-201ENST00000566062 339 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 AC080100.1-201ENST00000624239 5356 ntBASIC2.31□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-34-201ENST00000362441 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-12-201ENST00000362583 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.49-201ENST00000362714 112 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-29-201ENST00000362834 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-9-201ENST00000362912 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-21-201ENST00000362963 81 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-14-201ENST00000363090 81 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.118-201ENST00000363300 101 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-13-201ENST00000363358 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-41-201ENST00000363608 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-11-201ENST00000363616 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-5-201ENST00000363633 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-39-201ENST00000363694 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-4-201ENST00000363810 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-16-201ENST00000363887 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-6-201ENST00000363942 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-42-201ENST00000364273 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-15-201ENST00000364809 81 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-1-201ENST00000364961 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-26-201ENST00000365067 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-10-201ENST00000365073 81 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-43-201ENST00000365503 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-36-201ENST00000365629 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 RNU6-756P-201ENST00000383997 107 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.508-201ENST00000384502 114 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 MIR17-201ENST00000385012 84 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 MIR1302-5-201ENST00000408164 150 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 RNU7-34P-201ENST00000459394 64 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 RNU7-96P-201ENST00000459535 64 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 RNU6-998P-201ENST00000515894 101 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORA31.4-201ENST00000516049 129 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.694-201ENST00000516677 117 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 IGLV3-17-201ENST00000519099 244 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 MIR3683-201ENST00000580847 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 SNORD115-40-201ENST00000606510 82 ntBASIC2.3□□□□□ -2.04
PDLIM7Q9NR12 MIR302B-201ENST00000362188 73 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 RNU6-766P-201ENST00000362478 107 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.323-201ENST00000365157 109 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 SNORA51.5-201ENST00000384126 131 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 RNU6-296P-201ENST00000384608 107 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 AC019129.1-201ENST00000403786 261 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 AL035398.1-201ENST00000430869 322 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 RNU6-94P-201ENST00000607728 107 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 MIR4679-1-201ENST00000637619 75 ntBASIC2.29□□□□□ -2.04
PDLIM7Q9NR12 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 RNU6-112P-201ENST00000363599 104 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.328-201ENST00000365208 113 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.344-201ENST00000365381 112 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 RNU6-321P-201ENST00000410912 106 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 RPL23AP6-201ENST00000446637 472 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 RNA5SP233-201ENST00000459153 113 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 RNA5SP182-201ENST00000516064 82 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 MIR5582-201ENST00000579697 68 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 AC006254.2-201ENST00000603259 279 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 Y_RNA.783-201ENST00000613546 102 ntBASIC2.28□□□□□ -2.04
PDLIM7Q9NR12 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 U8.6-201ENST00000364939 135 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 MIR452-201ENST00000385020 85 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 SNORA40.18-201ENST00000391200 128 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 RNU2-11P-201ENST00000459191 187 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 AC068339.1-201ENST00000526965 141 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 MIR4709-201ENST00000577272 72 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 MIR3163-201ENST00000581592 73 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 AC021506.2-201ENST00000612354 169 ntBASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PDLIM7Q9NR12 AC005336.3-201ENST00000623833 2679 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 MIR378A-201ENST00000362177 66 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 MIR548D2-201ENST00000384955 97 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 MIR136-201ENST00000385207 82 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 RNY4P30-201ENST00000410216 95 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 RNA5SP144-201ENST00000410846 116 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 RNU7-45P-201ENST00000459460 63 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 AC107297.1-201ENST00000459991 176 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 SNORA31.11-201ENST00000516528 139 ntBASIC2.26□□□□□ -2.05
PDLIM7Q9NR12 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms