Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 MIR2115-201ENST00000516657 100 ntBASIC1.53□□□□□ -2.16
PCDH12Q9NPG4 U6.106-201ENST00000636360 105 ntBASIC1.53□□□□□ -2.16
PCDH12Q9NPG4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PCDH12Q9NPG4 MIR1185-1-201ENST00000408598 86 ntBASIC1.52□□□□□ -2.17
PCDH12Q9NPG4 AL035398.1-201ENST00000430869 322 ntBASIC1.52□□□□□ -2.17
PCDH12Q9NPG4 RNU6-958P-201ENST00000516995 106 ntBASIC1.52□□□□□ -2.17
PCDH12Q9NPG4 MIR4431-201ENST00000579990 94 ntBASIC1.52□□□□□ -2.17
PCDH12Q9NPG4 MIR3129-201ENST00000581095 76 ntBASIC1.52□□□□□ -2.17
PCDH12Q9NPG4 SNORA25.7-201ENST00000364375 127 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 RNU6-47P-201ENST00000383866 107 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 SNORA1-201ENST00000384107 130 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 Y_RNA.521-201ENST00000384560 114 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 SNORA75.2-201ENST00000391138 150 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 SNORA75.3-201ENST00000391231 150 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 AC006461.1-201ENST00000412637 326 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 RNU7-73P-201ENST00000458743 63 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 RNA5SP404-201ENST00000517118 132 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 AP002392.1-201ENST00000537692 208 ntBASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
PCDH12Q9NPG4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 MIR378A-201ENST00000362177 66 ntBASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 MIR19B1-201ENST00000384829 87 ntBASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 SNORD77.3-201ENST00000391113 65 ntBASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 BTF3P4-201ENST00000418852 495 ntBASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 RNU7-80P-201ENST00000459562 61 ntBASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 AC107027.2-201ENST00000512197 115 ntBASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 AC008163.1-202ENST00000636004 2889 ntBASIC1.5□□□□□ -2.17
PCDH12Q9NPG4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 Y_RNA.29-201ENST00000362570 113 ntBASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 RNU1-124P-201ENST00000363861 145 ntBASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 Y_RNA.440-201ENST00000384120 114 ntBASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 Y_RNA.454-201ENST00000384224 113 ntBASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 AL354695.1-201ENST00000427935 228 ntBASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 AC002429.1-201ENST00000437672 148 ntBASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 AL392103.1-201ENST00000447000 198 ntBASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 MIR548AO-201ENST00000579992 96 ntBASIC1.49□□□□□ -2.17
PCDH12Q9NPG4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 MIR302B-201ENST00000362188 73 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 RNU6-978P-201ENST00000364371 103 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 Y_RNA.357-201ENST00000365487 109 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 RNA5SP127-201ENST00000411051 133 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 AP1B1P2-201ENST00000416196 106 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 RNU6-138P-201ENST00000515952 107 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 RNU7-70P-201ENST00000516941 66 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 MIR5197-201ENST00000583721 112 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 AL512598.1-201ENST00000610158 273 ntBASIC1.48□□□□□ -2.17
PCDH12Q9NPG4 RNU7-95P-201ENST00000459222 64 ntBASIC1.47□□□□□ -2.17
PCDH12Q9NPG4 AC005840.1-201ENST00000498412 377 ntBASIC1.47□□□□□ -2.17
PCDH12Q9NPG4 RNU6-998P-201ENST00000515894 101 ntBASIC1.47□□□□□ -2.17
PCDH12Q9NPG4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.47□□□□□ -2.17
PCDH12Q9NPG4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.47□□□□□ -2.17
PCDH12Q9NPG4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.47□□□□□ -2.17
PCDH12Q9NPG4 AP000753.3-201ENST00000604083 169 ntBASIC1.47□□□□□ -2.17
PCDH12Q9NPG4 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.47□□□□□ -2.17
PCDH12Q9NPG4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
PCDH12Q9NPG4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PCDH12Q9NPG4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PCDH12Q9NPG4 Y_RNA.337-201ENST00000365312 102 ntBASIC1.46□□□□□ -2.18
PCDH12Q9NPG4 Y_RNA.351-201ENST00000365436 96 ntBASIC1.46□□□□□ -2.18
PCDH12Q9NPG4 MIR200A-201ENST00000384875 90 ntBASIC1.46□□□□□ -2.18
PCDH12Q9NPG4 RNA5SP261-201ENST00000410536 106 ntBASIC1.46□□□□□ -2.18
PCDH12Q9NPG4 MIR337-201ENST00000362281 93 ntBASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 MIR624-201ENST00000385217 97 ntBASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 MIR320A-201ENST00000385302 82 ntBASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 MT-TN-201ENST00000387400 73 ntBASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 RNU6-613P-201ENST00000410412 108 ntBASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 RNU6-1219P-201ENST00000516143 112 ntBASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
PCDH12Q9NPG4 ZNF209P-201ENST00000593450 2304 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 RNU6-597P-201ENST00000365620 102 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 Y_RNA.785-201ENST00000384290 109 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 MIR1302-7-201ENST00000408841 72 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 RNU2-11P-201ENST00000459191 187 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 RPS23P4-201ENST00000487908 423 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 SNORA81.3-201ENST00000517283 198 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 MIR4498-201ENST00000577599 66 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 snoU13.31-201ENST00000607291 104 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 MIR6516-201ENST00000630554 81 ntBASIC1.44□□□□□ -2.18
PCDH12Q9NPG4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
PCDH12Q9NPG4 MIR342-201ENST00000362212 99 ntBASIC1.43□□□□□ -2.18
PCDH12Q9NPG4 SNORD111-201ENST00000408139 94 ntBASIC1.43□□□□□ -2.18
PCDH12Q9NPG4 MIR548I3-201ENST00000408378 149 ntBASIC1.43□□□□□ -2.18
PCDH12Q9NPG4 SEPT7P4-201ENST00000437076 306 ntBASIC1.43□□□□□ -2.18
PCDH12Q9NPG4 RNU7-120P-201ENST00000459334 63 ntBASIC1.43□□□□□ -2.18
PCDH12Q9NPG4 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
PCDH12Q9NPG4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.43□□□□□ -2.18
PCDH12Q9NPG4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms