Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Y_RNA.343-201ENST00000365354 112 ntBASIC1.82□□□□□ -2.12
VTA1Q9NP79 MIR520C-201ENST00000385005 87 ntBASIC1.82□□□□□ -2.12
VTA1Q9NP79 MIR548M-201ENST00000408260 86 ntBASIC1.82□□□□□ -2.12
VTA1Q9NP79 RNU6-938P-201ENST00000411285 103 ntBASIC1.82□□□□□ -2.12
VTA1Q9NP79 RPL39P39-201ENST00000455840 151 ntBASIC1.82□□□□□ -2.12
VTA1Q9NP79 RNU7-96P-201ENST00000459535 64 ntBASIC1.82□□□□□ -2.12
VTA1Q9NP79 Y_RNA.703-201ENST00000516846 111 ntBASIC1.82□□□□□ -2.12
VTA1Q9NP79 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.81□□□□□ -2.12
VTA1Q9NP79 RNY1P10-201ENST00000363268 113 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 Y_RNA.215-201ENST00000364204 112 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 RNU6-60P-201ENST00000364792 103 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 RNU4-11P-201ENST00000365287 132 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 Y_RNA.440-201ENST00000384120 114 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 SNORA27-201ENST00000384323 126 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 Y_RNA.488-201ENST00000384403 102 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 Y_RNA.584-201ENST00000391090 114 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 RNU2-13P-201ENST00000515909 113 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 RNU6-902P-201ENST00000517212 91 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 MIR4764-201ENST00000580680 88 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 AL645939.4-201ENST00000604495 135 ntBASIC1.81□□□□□ -2.12
VTA1Q9NP79 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
VTA1Q9NP79 MIR337-201ENST00000362281 93 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 RNU6-1082P-201ENST00000364574 107 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 SNORD50.2-201ENST00000365465 70 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 SNORD18B-201ENST00000365659 72 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 SNORA24-201ENST00000384096 131 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 SNORD41-201ENST00000386967 70 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 RNU6-588P-201ENST00000410281 105 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.8□□□□□ -2.12
VTA1Q9NP79 RPS26P48-201ENST00000491713 339 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 RNU7-181P-201ENST00000517234 74 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 AC024614.2-201ENST00000577584 372 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 MIR548AR-201ENST00000582191 57 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 MIR3658-201ENST00000636291 56 ntBASIC1.8□□□□□ -2.12
VTA1Q9NP79 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.79□□□□□ -2.12
VTA1Q9NP79 Y_RNA.120-201ENST00000363304 110 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 Y_RNA.506-201ENST00000384494 102 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 AL603908.1-201ENST00000406098 201 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.79□□□□□ -2.12
VTA1Q9NP79 RPS29P24-201ENST00000486345 171 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 TRMT112P2-201ENST00000512910 132 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 RNU7-53P-201ENST00000516705 60 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 SNORD36C-201ENST00000516733 66 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 RNU6-922P-201ENST00000516753 99 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 MTND5P41-201ENST00000517498 206 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 BX248123.2-201ENST00000606318 124 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 AL121890.5-201ENST00000620848 304 ntBASIC1.79□□□□□ -2.12
VTA1Q9NP79 RNA5SP48-201ENST00000363969 126 ntBASIC1.78□□□□□ -2.12
VTA1Q9NP79 Y_RNA.497-201ENST00000384447 98 ntBASIC1.78□□□□□ -2.12
VTA1Q9NP79 MIR517C-201ENST00000385103 95 ntBASIC1.78□□□□□ -2.12
VTA1Q9NP79 SNORA67.6-201ENST00000391093 99 ntBASIC1.78□□□□□ -2.12
VTA1Q9NP79 SNORD111.1-201ENST00000516421 86 ntBASIC1.78□□□□□ -2.12
VTA1Q9NP79 RNU7-70P-201ENST00000516941 66 ntBASIC1.78□□□□□ -2.12
VTA1Q9NP79 AC090821.2-201ENST00000523552 176 ntBASIC1.78□□□□□ -2.12
VTA1Q9NP79 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
VTA1Q9NP79 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
VTA1Q9NP79 AP001340.1-201ENST00000624405 217 ntBASIC1.78□□□□□ -2.12
VTA1Q9NP79 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VTA1Q9NP79 Y_RNA.226-201ENST00000364337 114 ntBASIC1.77□□□□□ -2.13
VTA1Q9NP79 Y_RNA.251-201ENST00000364551 99 ntBASIC1.77□□□□□ -2.13
VTA1Q9NP79 RPS29P29-201ENST00000456396 171 ntBASIC1.77□□□□□ -2.13
VTA1Q9NP79 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.77□□□□□ -2.13
VTA1Q9NP79 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.77□□□□□ -2.13
VTA1Q9NP79 AC008133.2-201ENST00000624540 351 ntBASIC1.77□□□□□ -2.13
VTA1Q9NP79 SNORA51.10-201ENST00000384418 136 ntBASIC1.76□□□□□ -2.13
VTA1Q9NP79 AL035398.1-201ENST00000430869 322 ntBASIC1.76□□□□□ -2.13
VTA1Q9NP79 AL392103.1-201ENST00000447000 198 ntBASIC1.76□□□□□ -2.13
VTA1Q9NP79 RNU7-197P-201ENST00000458836 62 ntBASIC1.76□□□□□ -2.13
VTA1Q9NP79 RNU6-998P-201ENST00000515894 101 ntBASIC1.76□□□□□ -2.13
VTA1Q9NP79 AL512310.8-201ENST00000550183 120 ntBASIC1.76□□□□□ -2.13
VTA1Q9NP79 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.76□□□□□ -2.13
VTA1Q9NP79 AC243994.1-201ENST00000618627 109 ntBASIC1.76□□□□□ -2.13
VTA1Q9NP79 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
VTA1Q9NP79 Y_RNA.52-201ENST00000362760 96 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 Y_RNA.351-201ENST00000365436 96 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 RNU6-125P-201ENST00000384505 107 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 RNA5SP261-201ENST00000410536 106 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 AC009474.2-201ENST00000451383 136 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 RNU7-73P-201ENST00000458743 63 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 snoU13.16-201ENST00000459350 104 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 AL133373.1-201ENST00000497098 94 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 RNU6-113P-201ENST00000516653 101 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 SCARNA15-202ENST00000516881 127 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 AC019176.1-201ENST00000518519 225 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 MIR4791-201ENST00000607666 84 ntBASIC1.75□□□□□ -2.13
VTA1Q9NP79 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
VTA1Q9NP79 MIR569-201ENST00000385228 96 ntBASIC1.74□□□□□ -2.13
VTA1Q9NP79 MIR613-201ENST00000385248 95 ntBASIC1.74□□□□□ -2.13
VTA1Q9NP79 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
VTA1Q9NP79 AL603914.1-201ENST00000401964 204 ntBASIC1.74□□□□□ -2.13
VTA1Q9NP79 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.74□□□□□ -2.13
VTA1Q9NP79 RNU6-1149P-201ENST00000516810 97 ntBASIC1.74□□□□□ -2.13
VTA1Q9NP79 SNORA31.24-201ENST00000517232 57 ntBASIC1.74□□□□□ -2.13
VTA1Q9NP79 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
VTA1Q9NP79 AC011603.4-201ENST00000611325 277 ntBASIC1.74□□□□□ -2.13
VTA1Q9NP79 SNORD28B-201ENST00000390993 75 ntBASIC1.73□□□□□ -2.13
VTA1Q9NP79 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms