Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SNORD115-29-201ENST00000362834 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-9-201ENST00000362912 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-21-201ENST00000362963 81 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RNU6-888P-201ENST00000363010 101 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-14-201ENST00000363090 81 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RNU6-1309P-201ENST00000363305 108 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-13-201ENST00000363358 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-41-201ENST00000363608 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-11-201ENST00000363616 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-5-201ENST00000363633 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-39-201ENST00000363694 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-4-201ENST00000363810 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-16-201ENST00000363887 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-6-201ENST00000363942 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-42-201ENST00000364273 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 snoU2_19.4-201ENST00000364329 80 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-15-201ENST00000364809 81 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-1-201ENST00000364961 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-26-201ENST00000365067 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-10-201ENST00000365073 81 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-43-201ENST00000365503 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-36-201ENST00000365629 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 MIR548A2-201ENST00000384956 97 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 MIR518F-201ENST00000384973 87 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 MIR568-201ENST00000385036 95 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 MIR616-201ENST00000385293 97 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORA26-201ENST00000391286 122 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 MIR942-201ENST00000401111 86 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RNU6-613P-201ENST00000410412 108 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RNU2-38P-201ENST00000410856 79 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 AC107297.1-201ENST00000459991 176 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RNU6-693P-201ENST00000516134 107 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.679-201ENST00000516416 91 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RNA5SP153-201ENST00000516498 76 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RNU6-365P-201ENST00000517113 106 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 MIR548AO-201ENST00000579992 96 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 AC131055.1-201ENST00000584626 316 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-40-201ENST00000606510 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 RNU6-94P-201ENST00000607728 107 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 AC243994.1-201ENST00000618627 109 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 AL365265.1-201ENST00000621045 234 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 MIR6516-201ENST00000630554 81 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 MTND1P7-201ENST00000632801 297 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.133-201ENST00000363428 110 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.277-201ENST00000364754 102 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 RNU6-484P-201ENST00000384016 107 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 SNORD61-201ENST00000384252 73 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.556-201ENST00000384677 113 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 RNU6-1228P-201ENST00000391014 107 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 SNORA40.5-201ENST00000391061 128 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 SNORD111-201ENST00000408139 94 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 AC090844.1-201ENST00000422019 156 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.65□□□□□ -2.31
NXF3Q9H4D5 RNU6-327P-201ENST00000516270 127 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 RNU6-1299P-201ENST00000516316 100 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 SCARNA15.1-201ENST00000516384 125 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 RNU6-504P-201ENST00000516568 104 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 MIR2115-201ENST00000516657 100 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 AC036111.3-201ENST00000526389 112 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 AC023934.1-201ENST00000574529 2389 ntBASIC0.65□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.37-201ENST00000362606 108 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.54-201ENST00000362766 105 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.66-201ENST00000362862 102 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.76-201ENST00000362931 109 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.91-201ENST00000363042 107 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 RNU6-653P-201ENST00000363074 106 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 SNORD113.3-201ENST00000364630 78 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.634-201ENST00000364811 113 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.288-201ENST00000364854 92 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 RNU6-396P-201ENST00000365369 105 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.416-201ENST00000384014 113 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.562-201ENST00000384695 113 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 AL606845.1-201ENST00000404881 255 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.622-201ENST00000411091 108 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 RNU6-938P-201ENST00000411285 103 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 MTND2P23-201ENST00000422990 651 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 MTCYBP9-201ENST00000431021 303 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 SNRPGP8-201ENST00000454064 226 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 SNORD127-201ENST00000458892 86 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 RNU6-561P-201ENST00000516222 102 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 RNY3P16-201ENST00000516338 101 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 RNU6-1270P-201ENST00000517128 108 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.64□□□□□ -2.31
NXF3Q9H4D5 AC097639.2-201ENST00000603159 172 ntBASIC0.64□□□□□ -2.31
NXF3Q9H4D5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.64□□□□□ -2.31
NXF3Q9H4D5 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.162-201ENST00000363683 102 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.241-201ENST00000364470 117 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 Y_RNA.432-201ENST00000384087 111 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 RNU6-110P-201ENST00000384508 104 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 MT-TN-201ENST00000387400 73 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 RNU6-381P-201ENST00000391259 108 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 MIR936-201ENST00000401264 98 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 MIR548H3-201ENST00000408771 118 ntBASIC0.63□□□□□ -2.31
NXF3Q9H4D5 AC015818.7-201ENST00000428754 109 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms