Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AP001340.1-201ENST00000624405 217 ntBASIC1.6□□□□□ -2.15
CDT1Q9H211 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.6□□□□□ -2.15
CDT1Q9H211 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.15
CDT1Q9H211 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CDT1Q9H211 RNU6-1123P-201ENST00000362347 106 ntBASIC1.59□□□□□ -2.15
CDT1Q9H211 Y_RNA.52-201ENST00000362760 96 ntBASIC1.59□□□□□ -2.15
CDT1Q9H211 snoU2-30.1-201ENST00000365012 70 ntBASIC1.59□□□□□ -2.15
CDT1Q9H211 SNORD24-201ENST00000383884 75 ntBASIC1.59□□□□□ -2.15
CDT1Q9H211 SNORA22C-201ENST00000384614 134 ntBASIC1.59□□□□□ -2.15
CDT1Q9H211 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
CDT1Q9H211 MIR548O-201ENST00000408583 114 ntBASIC1.59□□□□□ -2.15
CDT1Q9H211 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.59□□□□□ -2.15
CDT1Q9H211 SNORD36C-201ENST00000516733 66 ntBASIC1.59□□□□□ -2.15
CDT1Q9H211 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CDT1Q9H211 RNU6-235P-201ENST00000362644 107 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 SNORD14E-201ENST00000364009 85 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 Y_RNA.291-201ENST00000364886 113 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 RNU6-42P-201ENST00000384165 107 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 MIR624-201ENST00000385217 97 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 MIR891A-201ENST00000401237 79 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 snoU13.9-201ENST00000458927 103 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 RNU7-107P-201ENST00000459121 61 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 Y_RNA.651-201ENST00000459380 103 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 CYCTP-201ENST00000504253 315 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 SCARNA15-202ENST00000516881 127 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 AC090142.3-201ENST00000519012 385 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 AP001328.1-201ENST00000528550 176 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 MIR3121-201ENST00000579680 77 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 AC131055.1-201ENST00000584626 316 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 AC087685.1-201ENST00000587507 141 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.58□□□□□ -2.16
CDT1Q9H211 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
CDT1Q9H211 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
CDT1Q9H211 AL442644.1-201ENST00000454390 3105 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 RNA5SP259-201ENST00000365541 109 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 RNU6-442P-201ENST00000383968 104 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 MIR513A1-201ENST00000385138 129 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 SNORA18.4-201ENST00000516440 124 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 AC015688.6-201ENST00000577737 104 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.57□□□□□ -2.16
CDT1Q9H211 AC011603.4-201ENST00000611325 277 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 MIR6504-201ENST00000613520 61 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 MIR8063-201ENST00000621930 81 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 AC106754.2-201ENST00000623006 233 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 AC027279.3-201ENST00000625055 122 ntBASIC1.57□□□□□ -2.16
CDT1Q9H211 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.57□□□□□ -2.16
CDT1Q9H211 Y_RNA.37-201ENST00000362606 108 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 RNU6-833P-201ENST00000363486 107 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 RNU6-1117P-201ENST00000384525 104 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 MIR526A1-201ENST00000384897 85 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 MIR516B2-201ENST00000385190 85 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 RNU6-1168P-201ENST00000390831 104 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 SNORA26-201ENST00000391286 122 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 RNA5SP127-201ENST00000411051 133 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 AC015922.2-201ENST00000435593 184 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 RNU4-57P-201ENST00000515980 135 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 SNORA31.4-201ENST00000516049 129 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 RNA5SP236-201ENST00000516169 116 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 RNU6-970P-201ENST00000516312 107 ntBASIC1.56□□□□□ -2.16
CDT1Q9H211 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
CDT1Q9H211 Y_RNA.120-201ENST00000363304 110 ntBASIC1.55□□□□□ -2.16
CDT1Q9H211 Y_RNA.336-201ENST00000365307 109 ntBASIC1.55□□□□□ -2.16
CDT1Q9H211 RNU6-1292P-201ENST00000383856 107 ntBASIC1.55□□□□□ -2.16
CDT1Q9H211 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.55□□□□□ -2.16
CDT1Q9H211 RNU6-1149P-201ENST00000516810 97 ntBASIC1.55□□□□□ -2.16
CDT1Q9H211 SNORA4-201ENST00000584302 138 ntBASIC1.55□□□□□ -2.16
CDT1Q9H211 AL078603.1-201ENST00000603824 313 ntBASIC1.55□□□□□ -2.16
CDT1Q9H211 AC108081.1-201ENST00000604358 221 ntBASIC1.55□□□□□ -2.16
CDT1Q9H211 AC015726.2-201ENST00000620112 122 ntBASIC1.55□□□□□ -2.16
CDT1Q9H211 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 MIR302D-201ENST00000362275 68 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 RNU6-1290P-201ENST00000362957 109 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 Y_RNA.114-201ENST00000363265 113 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 SNORD115-28-201ENST00000363931 81 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 Y_RNA.280-201ENST00000364765 112 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 MIR802-201ENST00000390235 94 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 Y_RNA.630-201ENST00000411370 108 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.54□□□□□ -2.16
CDT1Q9H211 AC009474.2-201ENST00000451383 136 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.54□□□□□ -2.16
CDT1Q9H211 RNU5E-3P-201ENST00000515913 68 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 RNU6-1333P-201ENST00000516162 93 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 RNA5SP220-201ENST00000516298 104 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 Y_RNA.690-201ENST00000516603 95 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 RNU7-181P-201ENST00000517234 74 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 IGKV1-22-201ENST00000524313 326 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 MIR4421-201ENST00000578133 69 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 HSPE1P19-201ENST00000603327 295 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 TUG1_4.1-201ENST00000619464 181 ntBASIC1.54□□□□□ -2.16
CDT1Q9H211 Y_RNA.127-201ENST00000363386 109 ntBASIC1.53□□□□□ -2.16
CDT1Q9H211 SNORD1A-201ENST00000364968 72 ntBASIC1.53□□□□□ -2.16
CDT1Q9H211 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
CDT1Q9H211 RNU6-1154P-201ENST00000391001 104 ntBASIC1.53□□□□□ -2.16
CDT1Q9H211 AL603914.1-201ENST00000401964 204 ntBASIC1.53□□□□□ -2.16
CDT1Q9H211 RNU6-659P-201ENST00000516454 104 ntBASIC1.53□□□□□ -2.16
CDT1Q9H211 RNU6-126P-201ENST00000516685 103 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms