Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC093850.1-201ENST00000454121 251 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 RNU2-11P-201ENST00000459191 187 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF38Q9H0F5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 MIR6840-201ENST00000611937 71 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RNF38Q9H0F5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 AL162726.3-218ENST00000636401 95 ntBASIC2.28□□□□□ -2.04
RNF38Q9H0F5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
RNF38Q9H0F5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RNF38Q9H0F5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
RNF38Q9H0F5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
RNF38Q9H0F5 RNU6-112P-201ENST00000363599 104 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 SNORA63D-201ENST00000364359 132 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 RNY1P7-201ENST00000384743 110 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 MIR520A-201ENST00000384862 85 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 MIR17-201ENST00000385012 84 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 RNA5SP144-201ENST00000410846 116 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 RNU7-34P-201ENST00000459394 64 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 RNU7-96P-201ENST00000459535 64 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 RNA5SP200-201ENST00000516360 103 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 AL773524.1-201ENST00000614065 229 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 AC021613.1-201ENST00000623880 111 ntBASIC2.27□□□□□ -2.05
RNF38Q9H0F5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RNF38Q9H0F5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.26□□□□□ -2.05
RNF38Q9H0F5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-34-201ENST00000362441 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-12-201ENST00000362583 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-29-201ENST00000362834 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-9-201ENST00000362912 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-21-201ENST00000362963 81 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-14-201ENST00000363090 81 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-13-201ENST00000363358 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-41-201ENST00000363608 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-11-201ENST00000363616 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-5-201ENST00000363633 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-39-201ENST00000363694 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-4-201ENST00000363810 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-16-201ENST00000363887 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-6-201ENST00000363942 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-42-201ENST00000364273 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-15-201ENST00000364809 81 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-1-201ENST00000364961 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-26-201ENST00000365067 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-10-201ENST00000365073 81 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-43-201ENST00000365503 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-36-201ENST00000365629 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RNF38Q9H0F5 AL022718.1-201ENST00000412004 84 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 AC079804.2-201ENST00000490376 200 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 RNU6-762P-201ENST00000517107 102 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.26□□□□□ -2.05
RNF38Q9H0F5 SNORD115-40-201ENST00000606510 82 ntBASIC2.26□□□□□ -2.05
RNF38Q9H0F5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.26□□□□□ -2.05
RNF38Q9H0F5 AC092881.1-201ENST00000638218 2733 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.25□□□□□ -2.05
RNF38Q9H0F5 SNORD114-1-201ENST00000362705 72 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 MIR1289-2-201ENST00000408360 111 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 UBL5P3-201ENST00000475112 231 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 RNU6-904P-201ENST00000516206 101 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 RNA5SP437-201ENST00000517249 129 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 AC004812.1-201ENST00000540773 146 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 AC095038.3-201ENST00000634439 195 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 MIR219B-201ENST00000637023 88 ntBASIC2.25□□□□□ -2.05
RNF38Q9H0F5 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RNF38Q9H0F5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
RNF38Q9H0F5 RNU6-833P-201ENST00000363486 107 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 RNU6-296P-201ENST00000384608 107 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 RNU6-1031P-201ENST00000384773 107 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 MIR1302-4-201ENST00000408701 150 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 RPS3AP1-201ENST00000413190 320 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 AC244636.1-201ENST00000421152 228 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 RPL23AP6-201ENST00000446637 472 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 RPL23AP63-201ENST00000498752 471 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 AC113410.1-201ENST00000505029 247 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 MIR1255B1-201ENST00000636325 63 ntBASIC2.24□□□□□ -2.05
RNF38Q9H0F5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.24□□□□□ -2.05
RNF38Q9H0F5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
RNF38Q9H0F5 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 Y_RNA.171-201ENST00000363760 102 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 Y_RNA.531-201ENST00000384589 121 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 RNU6-950P-201ENST00000384651 107 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 RPS23P4-201ENST00000487908 423 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.23□□□□□ -2.05
RNF38Q9H0F5 RNU6-958P-201ENST00000516995 106 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 Y_RNA.773-201ENST00000607168 90 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 Y_RNA.818-201ENST00000618813 71 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 AC087741.2-201ENST00000619415 172 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 MIR7843-201ENST00000622274 79 ntBASIC2.23□□□□□ -2.05
RNF38Q9H0F5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.23□□□□□ -2.05
RNF38Q9H0F5 Y_RNA.370-201ENST00000365589 108 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 RNU4-52P-201ENST00000384209 138 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 Y_RNA.558-201ENST00000384685 113 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 MIR504-201ENST00000385065 83 ntBASIC2.22□□□□□ -2.05
RNF38Q9H0F5 MIR1912-201ENST00000410389 80 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms