Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL513423.1-201ENST00000621695 132 ntBASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 AC021613.1-201ENST00000623880 111 ntBASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
FOXP3Q9BZS1 AC131280.1-202ENST00000624067 4211 ntBASIC2.34□□□□□ -2.03
FOXP3Q9BZS1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
FOXP3Q9BZS1 MIR504-201ENST00000385065 83 ntBASIC2.34□□□□□ -2.03
FOXP3Q9BZS1 MIR516B2-201ENST00000385190 85 ntBASIC2.34□□□□□ -2.03
FOXP3Q9BZS1 RN7SKP223-201ENST00000410582 62 ntBASIC2.34□□□□□ -2.03
FOXP3Q9BZS1 RNU2-11P-201ENST00000459191 187 ntBASIC2.34□□□□□ -2.03
FOXP3Q9BZS1 snoU13.15-201ENST00000459407 104 ntBASIC2.34□□□□□ -2.03
FOXP3Q9BZS1 RNA5SP481-201ENST00000516814 122 ntBASIC2.34□□□□□ -2.03
FOXP3Q9BZS1 MIR4709-201ENST00000577272 72 ntBASIC2.34□□□□□ -2.03
FOXP3Q9BZS1 AP006437.1-201ENST00000641440 3685 ntBASIC2.34□□□□□ -2.04
FOXP3Q9BZS1 AC092881.1-201ENST00000638218 2733 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 Y_RNA.78-201ENST00000362970 110 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 SNORA3A-201ENST00000364113 130 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 MIR136-201ENST00000385207 82 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 SNORD23.1-201ENST00000408212 104 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 RNY4P30-201ENST00000410216 95 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 AL022718.1-201ENST00000412004 84 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 snoU13.27-201ENST00000459278 104 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 RNU7-34P-201ENST00000459394 64 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 AC107297.1-201ENST00000459991 176 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 AC099513.1-201ENST00000490423 301 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 MIR4648-201ENST00000580107 72 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 SNORD14A-201ENST00000606526 91 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 AL162726.3-218ENST00000636401 95 ntBASIC2.33□□□□□ -2.04
FOXP3Q9BZS1 Y_RNA.370-201ENST00000365589 108 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 SNORA51.10-201ENST00000384418 136 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 Y_RNA.544-201ENST00000384650 113 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 MIR660-201ENST00000385235 97 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 POLR2J4-204ENST00000418424 324 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 AC093850.1-201ENST00000454121 251 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 RPS27P21-201ENST00000486977 252 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 RNU2-13P-201ENST00000515909 113 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 SNORA72.7-201ENST00000516349 94 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.32□□□□□ -2.04
FOXP3Q9BZS1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 SNORA24-201ENST00000384096 131 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 SNORA70.7-201ENST00000384159 133 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 RNA5SP270-201ENST00000411361 118 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 RPS23P4-201ENST00000487908 423 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 AC090255.1-201ENST00000495779 349 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 RNU7-6P-201ENST00000516845 62 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 AC004812.1-201ENST00000540773 146 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 U1.36-201ENST00000620684 176 ntBASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
FOXP3Q9BZS1 Y_RNA.531-201ENST00000384589 121 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 RNU6-1319P-201ENST00000390855 104 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 RNU6-747P-201ENST00000390928 104 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 RNU6-241P-201ENST00000391148 104 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 RNU6-177P-201ENST00000411257 104 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 AL512326.2-201ENST00000426359 151 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 PGBD4P5-201ENST00000445958 426 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 SNORA40.13-201ENST00000516379 120 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 MIR4524B-201ENST00000581569 115 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 Y_RNA.818-201ENST00000618813 71 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 AC087741.2-201ENST00000619415 172 ntBASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
FOXP3Q9BZS1 RNU6-661P-201ENST00000362409 107 ntBASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 MIR526A1-201ENST00000384897 85 ntBASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 MIR590-201ENST00000385008 97 ntBASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 MIR1912-201ENST00000410389 80 ntBASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 AL356320.1-201ENST00000429616 163 ntBASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 RNU7-53P-201ENST00000516705 60 ntBASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 MIR4769-201ENST00000584126 77 ntBASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.29□□□□□ -2.04
FOXP3Q9BZS1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 SNORD115-19-201ENST00000363098 82 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 SNORD115-18-201ENST00000363293 82 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 SNORD115-17-201ENST00000364612 82 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 MIR1289-2-201ENST00000408360 111 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 SNORA19.1-201ENST00000410656 129 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 RNA5SP100-201ENST00000410903 110 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 RNA5SP59-201ENST00000410922 110 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 RPL39P25-201ENST00000449384 154 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 RPS29P29-201ENST00000456396 171 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 RNU6-893P-201ENST00000458841 100 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 RNU7-45P-201ENST00000459460 63 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 SNORD123-201ENST00000459473 70 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 RNU6-904P-201ENST00000516206 101 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 MIR514B-201ENST00000516774 80 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 MIR6873-201ENST00000622788 63 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 AC095038.3-201ENST00000634439 195 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 MIR6841-201ENST00000637129 72 ntBASIC2.28□□□□□ -2.04
FOXP3Q9BZS1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
FOXP3Q9BZS1 MIR424-201ENST00000362227 98 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 443.8 ms