Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 SNORA22.1-201ENST00000362701 134 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 Y_RNA.377-201ENST00000365644 108 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 RNU6-679P-201ENST00000391003 106 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 U8.16-201ENST00000391279 133 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 SNORA11.2-201ENST00000408318 127 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 RN7SKP192-201ENST00000411291 327 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 AC104389.3-201ENST00000445629 235 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 RNA5SP168-201ENST00000516642 112 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 MIR4446-201ENST00000578505 67 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 AC025521.1-201ENST00000621624 286 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 AC022513.1-201ENST00000624512 117 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 AL512310.12-203ENST00000640543 90 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 AL442644.1-201ENST00000454390 3105 ntBASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.11□□□□□ -2.07
SSBP3Q9BWW4 AP000648.3-201ENST00000623539 4507 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 RNU6-228P-201ENST00000362700 106 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 Y_RNA.95-201ENST00000363079 95 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 RNU6-497P-201ENST00000365316 104 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 RNU6-1276P-201ENST00000365372 104 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 DEFA7P-201ENST00000382676 285 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 RNU6-616P-201ENST00000384353 107 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 MIR452-201ENST00000385020 85 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 MIR136-201ENST00000385207 82 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 RNA5SP210-201ENST00000391034 120 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 RNU6-972P-201ENST00000391208 107 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 RNA5SP320-201ENST00000516263 124 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 RNU6-1258P-201ENST00000516911 111 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 MIR5094-201ENST00000578766 85 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 MIR5092-201ENST00000583139 88 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 MIR548AE2-201ENST00000583456 67 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 MIR4777-201ENST00000583710 86 ntBASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.1□□□□□ -2.07
SSBP3Q9BWW4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
SSBP3Q9BWW4 RNU6-1201P-201ENST00000384227 107 ntBASIC2.09□□□□□ -2.07
SSBP3Q9BWW4 MIR516B2-201ENST00000385190 85 ntBASIC2.09□□□□□ -2.07
SSBP3Q9BWW4 MIR1255A-201ENST00000408338 113 ntBASIC2.09□□□□□ -2.07
SSBP3Q9BWW4 RNU6-887P-201ENST00000410660 100 ntBASIC2.09□□□□□ -2.07
SSBP3Q9BWW4 RNU6-521P-201ENST00000516663 105 ntBASIC2.09□□□□□ -2.07
SSBP3Q9BWW4 MIR3126-201ENST00000577443 74 ntBASIC2.09□□□□□ -2.07
SSBP3Q9BWW4 MIR548Z-201ENST00000584743 97 ntBASIC2.09□□□□□ -2.07
SSBP3Q9BWW4 AC007336.1-201ENST00000576365 3828 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 Y_RNA.190-201ENST00000363964 101 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 RNU1-91P-201ENST00000364746 163 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 Y_RNA.470-201ENST00000384307 117 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 RNA5SP508-201ENST00000411327 119 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 BTF3P4-201ENST00000418852 495 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 SUMO1P4-201ENST00000429430 302 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 HSPE1P9-201ENST00000440046 311 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 AL353813.1-201ENST00000440700 253 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 RPS29P29-201ENST00000456396 171 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 AC103810.6-201ENST00000606708 136 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 AC091304.10-201ENST00000641554 121 ntBASIC2.08□□□□□ -2.08
SSBP3Q9BWW4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 SNORA1.1-201ENST00000364671 133 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 Y_RNA.430-201ENST00000384081 110 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 RNU6-675P-201ENST00000384236 104 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 RNU11-3P-201ENST00000391111 133 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 RNA5SP225-201ENST00000410874 135 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 RNU7-34P-201ENST00000459394 64 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 MIR4439-201ENST00000583746 80 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 MIR6717-201ENST00000622747 73 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 MIR6841-201ENST00000637129 72 ntBASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SSBP3Q9BWW4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 RNU6-1313P-201ENST00000362622 102 ntBASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 Y_RNA.73-201ENST00000362910 113 ntBASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 Y_RNA.467-201ENST00000384297 102 ntBASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 RNA5SP181-201ENST00000410246 98 ntBASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 RNU2-7P-201ENST00000410794 178 ntBASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 RNA5SP24-201ENST00000516478 95 ntBASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 MIR4791-201ENST00000607666 84 ntBASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 SNORD3E-202ENST00000627253 216 ntBASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SSBP3Q9BWW4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SSBP3Q9BWW4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SSBP3Q9BWW4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.05□□□□□ -2.08
SSBP3Q9BWW4 RNA5SP456-201ENST00000364002 114 ntBASIC2.05□□□□□ -2.08
SSBP3Q9BWW4 SNORD115-35-201ENST00000365122 82 ntBASIC2.05□□□□□ -2.08
SSBP3Q9BWW4 SNORA32-201ENST00000384072 121 ntBASIC2.05□□□□□ -2.08
SSBP3Q9BWW4 MIR144-201ENST00000384886 86 ntBASIC2.05□□□□□ -2.08
SSBP3Q9BWW4 SNORA26.6-201ENST00000391256 115 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms