Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 SNORD115-4-201ENST00000363810 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-16-201ENST00000363887 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-6-201ENST00000363942 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-42-201ENST00000364273 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-15-201ENST00000364809 81 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-1-201ENST00000364961 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-26-201ENST00000365067 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-10-201ENST00000365073 81 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-43-201ENST00000365503 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-36-201ENST00000365629 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 MIR136-201ENST00000385207 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 MIR1267-201ENST00000408723 78 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 AC090821.2-201ENST00000523552 176 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 HSPE1P19-201ENST00000603327 295 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 SNORD115-40-201ENST00000606510 82 ntBASIC1.93□□□□□ -2.1
NDC1Q9BTX1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.92□□□□□ -2.1
NDC1Q9BTX1 RNU6-414P-201ENST00000363705 104 ntBASIC1.92□□□□□ -2.1
NDC1Q9BTX1 RNU6-880P-201ENST00000384526 107 ntBASIC1.92□□□□□ -2.1
NDC1Q9BTX1 RPL23AP6-201ENST00000446637 472 ntBASIC1.92□□□□□ -2.1
NDC1Q9BTX1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.92□□□□□ -2.1
NDC1Q9BTX1 COX6CP6-201ENST00000490840 228 ntBASIC1.92□□□□□ -2.1
NDC1Q9BTX1 RNY4P20-201ENST00000516678 93 ntBASIC1.92□□□□□ -2.1
NDC1Q9BTX1 AC021443.1-201ENST00000604478 211 ntBASIC1.92□□□□□ -2.1
NDC1Q9BTX1 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
NDC1Q9BTX1 MIR526A1-201ENST00000384897 85 ntBASIC1.91□□□□□ -2.1
NDC1Q9BTX1 MIR570-201ENST00000384917 97 ntBASIC1.91□□□□□ -2.1
NDC1Q9BTX1 RPS29P24-201ENST00000486345 171 ntBASIC1.91□□□□□ -2.1
NDC1Q9BTX1 RNU6-998P-201ENST00000515894 101 ntBASIC1.91□□□□□ -2.1
NDC1Q9BTX1 SNORA31.4-201ENST00000516049 129 ntBASIC1.91□□□□□ -2.1
NDC1Q9BTX1 RNU6-295P-201ENST00000516901 104 ntBASIC1.91□□□□□ -2.1
NDC1Q9BTX1 MIR5694-201ENST00000581190 76 ntBASIC1.91□□□□□ -2.1
NDC1Q9BTX1 MIR5002-201ENST00000584713 97 ntBASIC1.91□□□□□ -2.1
NDC1Q9BTX1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.9□□□□□ -2.11
NDC1Q9BTX1 RNU6-755P-201ENST00000364400 103 ntBASIC1.9□□□□□ -2.11
NDC1Q9BTX1 RNU4-16P-201ENST00000364737 141 ntBASIC1.9□□□□□ -2.11
NDC1Q9BTX1 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
NDC1Q9BTX1 SNORA6-201ENST00000384033 151 ntBASIC1.9□□□□□ -2.11
NDC1Q9BTX1 RNU6-203P-201ENST00000384038 104 ntBASIC1.9□□□□□ -2.11
NDC1Q9BTX1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
NDC1Q9BTX1 HMGN2P23-201ENST00000456759 269 ntBASIC1.9□□□□□ -2.11
NDC1Q9BTX1 RNU7-96P-201ENST00000459535 64 ntBASIC1.9□□□□□ -2.11
NDC1Q9BTX1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.9□□□□□ -2.11
NDC1Q9BTX1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NDC1Q9BTX1 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NDC1Q9BTX1 RNU6-457P-201ENST00000363999 107 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 Y_RNA.298-201ENST00000364960 107 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 SNORA1.2-201ENST00000365189 134 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 Y_RNA.370-201ENST00000365589 108 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 RNU4-52P-201ENST00000384209 138 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 MIR17-201ENST00000385012 84 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 JTBP1-201ENST00000441314 247 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 RNU7-164P-201ENST00000459221 62 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 AC107297.1-201ENST00000459991 176 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 SUMO2P16-201ENST00000519475 264 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 AC007012.1-201ENST00000567192 175 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 AC022254.1-201ENST00000567857 235 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 MIR4305-201ENST00000583252 102 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
NDC1Q9BTX1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
NDC1Q9BTX1 RNU6-661P-201ENST00000362409 107 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 Y_RNA.198-201ENST00000364013 98 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 MIR583-201ENST00000384846 75 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NDC1Q9BTX1 SNORD28B-201ENST00000390993 75 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 AC004965.1-201ENST00000413033 213 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 AL445685.2-201ENST00000422551 342 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 AL035398.1-201ENST00000430869 322 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 RNU2-11P-201ENST00000459191 187 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 SNORD123-201ENST00000459473 70 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 RNA5SP458-201ENST00000516188 119 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 MIR548AR-201ENST00000582191 57 ntBASIC1.88□□□□□ -2.11
NDC1Q9BTX1 MIR302B-201ENST00000362188 73 ntBASIC1.87□□□□□ -2.11
NDC1Q9BTX1 MIR194-1-201ENST00000384892 85 ntBASIC1.87□□□□□ -2.11
NDC1Q9BTX1 MT-TI-201ENST00000387365 69 ntBASIC1.87□□□□□ -2.11
NDC1Q9BTX1 U8.13-201ENST00000390842 128 ntBASIC1.87□□□□□ -2.11
NDC1Q9BTX1 RNU7-123P-201ENST00000515911 60 ntBASIC1.87□□□□□ -2.11
NDC1Q9BTX1 RNU2-35P-201ENST00000516446 142 ntBASIC1.87□□□□□ -2.11
NDC1Q9BTX1 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
NDC1Q9BTX1 FAM106DP-201ENST00000586416 501 ntBASIC1.87□□□□□ -2.11
NDC1Q9BTX1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NDC1Q9BTX1 RNU6-439P-201ENST00000384188 106 ntBASIC1.86□□□□□ -2.11
NDC1Q9BTX1 RNU6-1104P-201ENST00000384723 104 ntBASIC1.86□□□□□ -2.11
NDC1Q9BTX1 AL603825.1-201ENST00000438481 80 ntBASIC1.86□□□□□ -2.11
NDC1Q9BTX1 MIR3683-201ENST00000580847 82 ntBASIC1.86□□□□□ -2.11
NDC1Q9BTX1 AC106754.2-201ENST00000623006 233 ntBASIC1.86□□□□□ -2.11
NDC1Q9BTX1 AC095038.3-201ENST00000634439 195 ntBASIC1.86□□□□□ -2.11
NDC1Q9BTX1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
NDC1Q9BTX1 Y_RNA.213-201ENST00000364178 111 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 Y_RNA.281-201ENST00000364774 94 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 Y_RNA.549-201ENST00000384657 102 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 RNU7-67P-201ENST00000459003 62 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 RNU7-45P-201ENST00000459460 63 ntBASIC1.85□□□□□ -2.11
NDC1Q9BTX1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 719.2 ms