Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 RNU7-120P-201ENST00000459334 63 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 SNORD123-201ENST00000459473 70 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 RNU6-861P-201ENST00000516745 106 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 RNU6-182P-201ENST00000516970 105 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 SNORA74.3-201ENST00000517108 154 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 RNU6-1270P-201ENST00000517128 108 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 AC007751.1-201ENST00000529260 376 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 AL160236.1-201ENST00000556317 195 ntBASIC1.22□□□□□ -2.21
RTP3Q9BQQ7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 RNU6-312P-201ENST00000364629 107 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 SNORD24-201ENST00000383884 75 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 MIR548A2-201ENST00000384956 97 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 U8.17-201ENST00000391292 132 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 RPS23P4-201ENST00000487908 423 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 RNU6-947P-201ENST00000516264 106 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 RN7SKP88-201ENST00000516847 250 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 RNU7-181P-201ENST00000517234 74 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 MIR5000-201ENST00000577717 103 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 MIR548AR-201ENST00000582191 57 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 AC097639.2-201ENST00000603159 172 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 AL357312.1-201ENST00000603879 298 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 7SK.8-201ENST00000612110 250 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 7SK.11-201ENST00000615477 250 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 7SK.13-201ENST00000622040 250 ntBASIC1.21□□□□□ -2.22
RTP3Q9BQQ7 Y_RNA.23-201ENST00000362496 106 ntBASIC1.2□□□□□ -2.22
RTP3Q9BQQ7 RNU6-888P-201ENST00000363010 101 ntBASIC1.2□□□□□ -2.22
RTP3Q9BQQ7 RNU6-682P-201ENST00000363843 106 ntBASIC1.2□□□□□ -2.22
RTP3Q9BQQ7 MIR518F-201ENST00000384973 87 ntBASIC1.2□□□□□ -2.22
RTP3Q9BQQ7 AC006461.1-201ENST00000412637 326 ntBASIC1.2□□□□□ -2.22
RTP3Q9BQQ7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.2□□□□□ -2.22
RTP3Q9BQQ7 RNU4-57P-201ENST00000515980 135 ntBASIC1.2□□□□□ -2.22
RTP3Q9BQQ7 MIR378D2-201ENST00000580636 98 ntBASIC1.2□□□□□ -2.22
RTP3Q9BQQ7 MIR8065-201ENST00000620577 100 ntBASIC1.2□□□□□ -2.22
RTP3Q9BQQ7 SNORD115-28-201ENST00000363931 81 ntBASIC1.19□□□□□ -2.22
RTP3Q9BQQ7 RNU6-643P-201ENST00000384018 107 ntBASIC1.19□□□□□ -2.22
RTP3Q9BQQ7 MIR520C-201ENST00000385005 87 ntBASIC1.19□□□□□ -2.22
RTP3Q9BQQ7 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
RTP3Q9BQQ7 SNORD28B-201ENST00000390993 75 ntBASIC1.19□□□□□ -2.22
RTP3Q9BQQ7 AF228730.3-201ENST00000436691 102 ntBASIC1.19□□□□□ -2.22
RTP3Q9BQQ7 SEPT7P4-201ENST00000437076 306 ntBASIC1.19□□□□□ -2.22
RTP3Q9BQQ7 MIR4431-201ENST00000579990 94 ntBASIC1.19□□□□□ -2.22
RTP3Q9BQQ7 AL096861.1-201ENST00000610899 123 ntBASIC1.19□□□□□ -2.22
RTP3Q9BQQ7 Y_RNA.240-201ENST00000364469 95 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 SNORA1-201ENST00000384107 130 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 RNY1P4-201ENST00000384595 115 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 MIR216A-201ENST00000385063 110 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 POLR2J4-204ENST00000418424 324 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 AC074198.2-201ENST00000508153 258 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 Y_RNA.662-201ENST00000516028 97 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 SNORD111.1-201ENST00000516421 86 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 MIR4764-201ENST00000580680 88 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 MIR3668-201ENST00000582138 75 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 MIR3192-201ENST00000584920 77 ntBASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
RTP3Q9BQQ7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 Y_RNA.370-201ENST00000365589 108 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 MIR570-201ENST00000384917 97 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 RNU6-907P-201ENST00000390924 102 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 RNU2-64P-201ENST00000411315 191 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 snoU13.25-201ENST00000458945 104 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 RNA5SP436-201ENST00000516020 115 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 SNORD116-25-201ENST00000516517 92 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 MIR3129-201ENST00000581095 76 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 AC134878.1-201ENST00000619901 243 ntBASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.17□□□□□ -2.22
RTP3Q9BQQ7 RNU6-978P-201ENST00000364371 103 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 Y_RNA.357-201ENST00000365487 109 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 Y_RNA.494-201ENST00000384432 111 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 Y_RNA.521-201ENST00000384560 114 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 RNU6-938P-201ENST00000411285 103 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 AC087499.4-201ENST00000448505 178 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 RPL39P39-201ENST00000455840 151 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 RNU7-41P-201ENST00000515917 61 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 RNU7-43P-201ENST00000516554 64 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
RTP3Q9BQQ7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.150-201ENST00000363562 102 ntBASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 Y_RNA.241-201ENST00000364470 117 ntBASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 SNORA1.2-201ENST00000365189 134 ntBASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 SNORD77.3-201ENST00000391113 65 ntBASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 RNU5E-9P-201ENST00000411164 104 ntBASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 SNORD36C-201ENST00000516733 66 ntBASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 AP003484.1-201ENST00000530974 250 ntBASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 FTX_2.1-201ENST00000618816 94 ntBASIC1.15□□□□□ -2.23
RTP3Q9BQQ7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms