Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
PKP2Q99959 RNU6-768P-201ENST00000384683 107 ntBASIC1.24□□□□□ -2.21
PKP2Q99959 MIR548O-201ENST00000408583 114 ntBASIC1.24□□□□□ -2.21
PKP2Q99959 RNU6-693P-201ENST00000516134 107 ntBASIC1.24□□□□□ -2.21
PKP2Q99959 SNORD116-25-201ENST00000516517 92 ntBASIC1.24□□□□□ -2.21
PKP2Q99959 RNU6-1270P-201ENST00000517128 108 ntBASIC1.24□□□□□ -2.21
PKP2Q99959 MTND5P41-201ENST00000517498 206 ntBASIC1.24□□□□□ -2.21
PKP2Q99959 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
PKP2Q99959 ZNF209P-201ENST00000593450 2304 ntBASIC1.24□□□□□ -2.21
PKP2Q99959 RNU6-597P-201ENST00000365620 102 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 RNU6-449P-201ENST00000383914 107 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 Y_RNA.393-201ENST00000383936 102 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 SNORD116-18-201ENST00000383961 92 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 SNORD38C-201ENST00000384381 69 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 Y_RNA.521-201ENST00000384560 114 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 MIR526A1-201ENST00000384897 85 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 MIR518F-201ENST00000384973 87 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 MIR452-201ENST00000385020 85 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.23□□□□□ -2.21
PKP2Q99959 RNU7-25P-201ENST00000516544 62 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 AC090142.3-201ENST00000519012 385 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 DNAJC19P2-201ENST00000593340 302 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 MIR6078-201ENST00000611069 100 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 MIR3658-201ENST00000636291 56 ntBASIC1.23□□□□□ -2.21
PKP2Q99959 RNU6-199P-201ENST00000362954 107 ntBASIC1.22□□□□□ -2.21
PKP2Q99959 RNU6-818P-201ENST00000364837 108 ntBASIC1.22□□□□□ -2.21
PKP2Q99959 SNORA1-201ENST00000384107 130 ntBASIC1.22□□□□□ -2.21
PKP2Q99959 Y_RNA.547-201ENST00000384654 119 ntBASIC1.22□□□□□ -2.21
PKP2Q99959 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
PKP2Q99959 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.22□□□□□ -2.21
PKP2Q99959 RNU7-200P-201ENST00000516105 62 ntBASIC1.22□□□□□ -2.21
PKP2Q99959 RNU6-830P-201ENST00000516353 107 ntBASIC1.22□□□□□ -2.21
PKP2Q99959 AC022709.1-201ENST00000615967 87 ntBASIC1.22□□□□□ -2.21
PKP2Q99959 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
PKP2Q99959 Y_RNA.506-201ENST00000384494 102 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 MIR516B2-201ENST00000385190 85 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.21□□□□□ -2.22
PKP2Q99959 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.21□□□□□ -2.22
PKP2Q99959 RNU6-917P-201ENST00000516294 104 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 MIR3646-201ENST00000578301 84 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 AL365205.2-201ENST00000594586 68 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 AC015726.2-201ENST00000620112 122 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 Y_RNA.778-201ENST00000620203 90 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 AC106754.2-201ENST00000623006 233 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 MTND1P7-201ENST00000632801 297 ntBASIC1.21□□□□□ -2.22
PKP2Q99959 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PKP2Q99959 RNU6-151P-201ENST00000364158 107 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 SNORA25.7-201ENST00000364375 127 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 RNU6-1082P-201ENST00000364574 107 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 RNU6-1336P-201ENST00000383886 109 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 RNY1P5-201ENST00000383890 115 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 Y_RNA.542-201ENST00000384641 111 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 MIR136-201ENST00000385207 82 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 RNU4-57P-201ENST00000515980 135 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 MIR3129-201ENST00000581095 76 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 PVT1_3.1-201ENST00000620853 95 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 MIR6844-201ENST00000637122 62 ntBASIC1.2□□□□□ -2.22
PKP2Q99959 SNORD115-28-201ENST00000363931 81 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 RNU4-11P-201ENST00000365287 132 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 RNU6-1292P-201ENST00000383856 107 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 Y_RNA.400-201ENST00000383963 111 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 RNU6-125P-201ENST00000384505 107 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 MIR598-201ENST00000384868 97 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 MIR653-201ENST00000385279 96 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 SNORD77.3-201ENST00000391113 65 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 SNORA75.5-201ENST00000391291 81 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 AF228730.3-201ENST00000436691 102 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 SUMO1P3-201ENST00000439961 304 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 AC092991.1-201ENST00000477176 376 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.19□□□□□ -2.22
PKP2Q99959 AC134878.1-201ENST00000619901 243 ntBASIC1.19□□□□□ -2.22
PKP2Q99959 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.19□□□□□ -2.22
PKP2Q99959 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PKP2Q99959 Y_RNA.37-201ENST00000362606 108 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 RNU6-774P-201ENST00000363238 107 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 RNU6-53P-201ENST00000365367 106 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 SNORA2.2-201ENST00000365473 135 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 Y_RNA.374-201ENST00000365606 101 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 RNU6-746P-201ENST00000384112 109 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 RNU6-342P-201ENST00000384521 104 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 SNORD37.2-201ENST00000391075 66 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 RNU6-588P-201ENST00000410281 105 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 RNU6-938P-201ENST00000411285 103 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 AC090049.2-201ENST00000550377 109 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 FAM106DP-201ENST00000586416 501 ntBASIC1.18□□□□□ -2.22
PKP2Q99959 RNY1P11-201ENST00000363759 113 ntBASIC1.17□□□□□ -2.22
PKP2Q99959 Y_RNA.205-201ENST00000364128 113 ntBASIC1.17□□□□□ -2.22
PKP2Q99959 Y_RNA.215-201ENST00000364204 112 ntBASIC1.17□□□□□ -2.22
PKP2Q99959 MIR624-201ENST00000385217 97 ntBASIC1.17□□□□□ -2.22
PKP2Q99959 U8.17-201ENST00000391292 132 ntBASIC1.17□□□□□ -2.22
PKP2Q99959 MIR548M-201ENST00000408260 86 ntBASIC1.17□□□□□ -2.22
PKP2Q99959 RNA5SP127-201ENST00000411051 133 ntBASIC1.17□□□□□ -2.22
PKP2Q99959 AC087499.4-201ENST00000448505 178 ntBASIC1.17□□□□□ -2.22
PKP2Q99959 SNORD123-201ENST00000459473 70 ntBASIC1.17□□□□□ -2.22
PKP2Q99959 RNU6-346P-201ENST00000516288 111 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms