Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SNORD127-201ENST00000458892 86 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 RNU6-1110P-201ENST00000516462 101 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 RNU7-53P-201ENST00000516705 60 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 RNU6-453P-201ENST00000516819 85 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 RNU6-958P-201ENST00000516995 106 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 AC025627.3-201ENST00000582078 182 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 AL442067.1-201ENST00000613261 223 ntBASIC0.82□□□□□ -2.28
CPNE1Q99829 Y_RNA.277-201ENST00000364754 102 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 RNU6-392P-201ENST00000364926 101 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 Y_RNA.410-201ENST00000383992 113 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 SNORD89-201ENST00000390981 114 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.81□□□□□ -2.28
CPNE1Q99829 MTCYBP9-201ENST00000431021 303 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.81□□□□□ -2.28
CPNE1Q99829 RPS29P24-201ENST00000486345 171 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 Y_RNA.676-201ENST00000516393 96 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 SNORD36C-201ENST00000516733 66 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 MIR4643-201ENST00000577473 78 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 MIR4264-201ENST00000583520 66 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 MIR4719-201ENST00000585233 84 ntBASIC0.81□□□□□ -2.28
CPNE1Q99829 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
CPNE1Q99829 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.8□□□□□ -2.28
CPNE1Q99829 RNU6-103P-201ENST00000363686 107 ntBASIC0.8□□□□□ -2.28
CPNE1Q99829 SNORD45.3-201ENST00000363836 72 ntBASIC0.8□□□□□ -2.28
CPNE1Q99829 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.8□□□□□ -2.28
CPNE1Q99829 MTND2P23-201ENST00000422990 651 ntBASIC0.8□□□□□ -2.28
CPNE1Q99829 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.8□□□□□ -2.28
CPNE1Q99829 Y_RNA.133-201ENST00000363428 110 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 Y_RNA.162-201ENST00000363683 102 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 Y_RNA.292-201ENST00000364904 97 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 RNU6-580P-201ENST00000365159 107 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 RNU6-125P-201ENST00000384505 107 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 Y_RNA.562-201ENST00000384695 113 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 SNORA79-201ENST00000408376 140 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 AL035398.1-201ENST00000430869 322 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 AF228730.3-201ENST00000436691 102 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 RNU6-1045P-201ENST00000516321 107 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 7SK.10-201ENST00000621414 298 ntBASIC0.79□□□□□ -2.28
CPNE1Q99829 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CPNE1Q99829 Y_RNA.76-201ENST00000362931 109 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 RNU6-728P-201ENST00000365375 104 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 RNU6-1189P-201ENST00000383958 107 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 MIR1827-201ENST00000408549 66 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 RNU6-1132P-201ENST00000459214 107 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 RNU7-96P-201ENST00000459535 64 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 SCARNA15.1-201ENST00000516384 125 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 AC011921.3-201ENST00000605540 361 ntBASIC0.78□□□□□ -2.28
CPNE1Q99829 MIR1-1-201ENST00000362147 71 ntBASIC0.77□□□□□ -2.29
CPNE1Q99829 RNU6-205P-201ENST00000390858 107 ntBASIC0.77□□□□□ -2.29
CPNE1Q99829 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
CPNE1Q99829 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
CPNE1Q99829 AC113410.1-201ENST00000505029 247 ntBASIC0.77□□□□□ -2.29
CPNE1Q99829 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
CPNE1Q99829 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.77□□□□□ -2.29
CPNE1Q99829 MIR3973-201ENST00000579824 107 ntBASIC0.77□□□□□ -2.29
CPNE1Q99829 RNU6-1335P-201ENST00000365426 107 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 SNORD38B-201ENST00000384690 67 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 RNU6-913P-201ENST00000390913 95 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 AC090844.1-201ENST00000422019 156 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 RNU6-998P-201ENST00000515894 101 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 Y_RNA.668-201ENST00000516233 93 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 MIR8055-201ENST00000610739 97 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 SNORD38B-202ENST00000625943 69 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 Z97988.1-201ENST00000637697 135 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
CPNE1Q99829 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
CPNE1Q99829 Y_RNA.440-201ENST00000384120 114 ntBASIC0.75□□□□□ -2.29
CPNE1Q99829 Y_RNA.542-201ENST00000384641 111 ntBASIC0.75□□□□□ -2.29
CPNE1Q99829 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
CPNE1Q99829 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CPNE1Q99829 SNORD77.3-201ENST00000391113 65 ntBASIC0.75□□□□□ -2.29
CPNE1Q99829 RNU4-43P-201ENST00000410628 137 ntBASIC0.75□□□□□ -2.29
CPNE1Q99829 Y_RNA.23-201ENST00000362496 106 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 SNORD27-201ENST00000363981 72 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 Y_RNA.238-201ENST00000364441 102 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 SNORA1.1-201ENST00000364671 133 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 SNORA25.9-201ENST00000365087 128 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 SNORA1-201ENST00000384107 130 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 MIR568-201ENST00000385036 95 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 MIR605-201ENST00000385078 83 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 MIR548I3-201ENST00000408378 149 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 SNORD99-201ENST00000408612 74 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 AC244023.1-201ENST00000426884 112 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 RNU2-11P-201ENST00000459191 187 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 RNU6-561P-201ENST00000516222 102 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 RNU6-113P-201ENST00000516653 101 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 MIR4744-201ENST00000581563 82 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 AC242498.1-201ENST00000604134 111 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 AC104465.1-201ENST00000611365 139 ntBASIC0.74□□□□□ -2.29
CPNE1Q99829 MIR8070-201ENST00000616510 88 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms