Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 RNA5SP233-201ENST00000459153 113 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 RNU6-240P-201ENST00000516098 97 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 RN7SKP179-201ENST00000516126 217 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 AC006441.5-201ENST00000612680 209 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 Y_RNA.35-201ENST00000362601 101 ntBASIC1.62□□□□□ -2.15
MEIS3Q99687 SNORD115-28-201ENST00000363931 81 ntBASIC1.62□□□□□ -2.15
MEIS3Q99687 SNORA40.6-201ENST00000391153 128 ntBASIC1.62□□□□□ -2.15
MEIS3Q99687 RNU11-5P-201ENST00000391216 129 ntBASIC1.62□□□□□ -2.15
MEIS3Q99687 Y_RNA.714-201ENST00000517065 90 ntBASIC1.62□□□□□ -2.15
MEIS3Q99687 RNU7-181P-201ENST00000517234 74 ntBASIC1.62□□□□□ -2.15
MEIS3Q99687 MIR5197-201ENST00000583721 112 ntBASIC1.62□□□□□ -2.15
MEIS3Q99687 AC087685.1-201ENST00000587507 141 ntBASIC1.62□□□□□ -2.15
MEIS3Q99687 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
MEIS3Q99687 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
MEIS3Q99687 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
MEIS3Q99687 RNU6-153P-201ENST00000364422 104 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 SNORA22-201ENST00000383907 134 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 RNU6-1189P-201ENST00000383958 107 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 RNU6-296P-201ENST00000384608 107 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 SNX2P2-201ENST00000424553 323 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 RNU7-34P-201ENST00000459394 64 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 MIR4778-201ENST00000577635 80 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 MIR4287-201ENST00000579398 78 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.61□□□□□ -2.15
MEIS3Q99687 AC025166.1-201ENST00000612411 163 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 MTND5P18-201ENST00000445624 1801 ntBASIC1.61□□□□□ -2.15
MEIS3Q99687 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
MEIS3Q99687 RNU6-112P-201ENST00000363599 104 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 RNU6-647P-201ENST00000364243 107 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 SNORA63D-201ENST00000364359 132 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 RNU4-16P-201ENST00000364737 141 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.6□□□□□ -2.15
MEIS3Q99687 RNU2-7P-201ENST00000410794 178 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 RNA5SP450-201ENST00000411206 102 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.6□□□□□ -2.15
MEIS3Q99687 AC004965.1-201ENST00000413033 213 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 SNORA31.4-201ENST00000516049 129 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 RNU6-126P-201ENST00000516685 103 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 AP003484.1-201ENST00000530974 250 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 SUB1P4-201ENST00000566062 339 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 snoU13.31-201ENST00000607291 104 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 MIR7974-201ENST00000615835 79 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 AC134878.1-201ENST00000619901 243 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 AL121890.5-201ENST00000620848 304 ntBASIC1.6□□□□□ -2.15
MEIS3Q99687 Y_RNA.440-201ENST00000384120 114 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 RNU6-1031P-201ENST00000384773 107 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 MIRLET7F2-201ENST00000385277 83 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 MIR548A3-201ENST00000385297 97 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 MT-TI-201ENST00000387365 69 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 SNORA48.1-201ENST00000390879 135 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 MTATP6P21-201ENST00000440681 189 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 PDCD5P2-201ENST00000507570 312 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 RNU7-12P-201ENST00000516030 62 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 RNU6-589P-201ENST00000516485 107 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 SNORA18.7-201ENST00000516910 131 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 Y_RNA.709-201ENST00000516952 92 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 AL627230.6-201ENST00000611129 280 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 AC021506.2-201ENST00000612354 169 ntBASIC1.59□□□□□ -2.15
MEIS3Q99687 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
MEIS3Q99687 AL596211.1-201ENST00000569873 2277 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 RNA5SP276-201ENST00000362580 94 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 RNU6-424P-201ENST00000384367 105 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 SNORD116-21-201ENST00000384507 92 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 Y_RNA.528-201ENST00000384575 108 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 MIR570-201ENST00000384917 97 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 RNA5SP465-201ENST00000391195 109 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 AC015922.2-201ENST00000435593 184 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.58□□□□□ -2.16
MEIS3Q99687 Y_RNA.649-201ENST00000459077 103 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 RNU7-45P-201ENST00000459460 63 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 AC099513.1-201ENST00000490423 301 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 AC022523.2-201ENST00000561045 150 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.58□□□□□ -2.16
MEIS3Q99687 AL670379.3-201ENST00000605040 251 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 AL137067.1-201ENST00000615933 120 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 AL353770.2-201ENST00000620024 78 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.58□□□□□ -2.16
MEIS3Q99687 U6.95-201ENST00000636931 70 ntBASIC1.58□□□□□ -2.16
MEIS3Q99687 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
MEIS3Q99687 RNU6-690P-201ENST00000365242 106 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 Y_RNA.336-201ENST00000365307 109 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 Y_RNA.351-201ENST00000365436 96 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 Y_RNA.549-201ENST00000384657 102 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 MIR526A1-201ENST00000384897 85 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
MEIS3Q99687 AL034345.1-201ENST00000407768 123 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 RN7SKP200-201ENST00000410564 320 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 CYCTP-201ENST00000504253 315 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 RNU7-28P-201ENST00000516759 62 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 AC090821.2-201ENST00000523552 176 ntBASIC1.57□□□□□ -2.16
MEIS3Q99687 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.57□□□□□ -2.16
MEIS3Q99687 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.57□□□□□ -2.16
MEIS3Q99687 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.56□□□□□ -2.16
MEIS3Q99687 RNU6-834P-201ENST00000362367 110 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 RNU6-349P-201ENST00000362402 107 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 Y_RNA.241-201ENST00000364470 117 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 RNU6-1104P-201ENST00000384723 104 ntBASIC1.56□□□□□ -2.16
MEIS3Q99687 MIR520A-201ENST00000384862 85 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms