Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
PHOX2BQ99453 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.22□□□□□ -1.89
PHOX2BQ99453 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PHOX2BQ99453 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PHOX2BQ99453 SNORD56.5-201ENST00000364281 72 ntBASIC3.21□□□□□ -1.9
PHOX2BQ99453 SNORA71.1-201ENST00000364523 117 ntBASIC3.21□□□□□ -1.9
PHOX2BQ99453 RNU6-1086P-201ENST00000410930 100 ntBASIC3.21□□□□□ -1.9
PHOX2BQ99453 AC022018.1-201ENST00000430685 241 ntBASIC3.21□□□□□ -1.9
PHOX2BQ99453 AC026333.2-201ENST00000542164 106 ntBASIC3.21□□□□□ -1.9
PHOX2BQ99453 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
PHOX2BQ99453 U8.2-201ENST00000363156 134 ntBASIC3.2□□□□□ -1.9
PHOX2BQ99453 SNORD114-10-201ENST00000363409 72 ntBASIC3.2□□□□□ -1.9
PHOX2BQ99453 RNA5SP501-201ENST00000410990 112 ntBASIC3.2□□□□□ -1.9
PHOX2BQ99453 AC099513.1-201ENST00000490423 301 ntBASIC3.2□□□□□ -1.9
PHOX2BQ99453 UBL5P1-201ENST00000507979 193 ntBASIC3.2□□□□□ -1.9
PHOX2BQ99453 RNU6-1006P-201ENST00000516998 103 ntBASIC3.2□□□□□ -1.9
PHOX2BQ99453 CYP3A52P-201ENST00000563326 91 ntBASIC3.2□□□□□ -1.9
PHOX2BQ99453 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PHOX2BQ99453 AC005336.3-201ENST00000623833 2679 ntBASIC3.19□□□□□ -1.9
PHOX2BQ99453 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
PHOX2BQ99453 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PHOX2BQ99453 Y_RNA.4-201ENST00000362333 112 ntBASIC3.19□□□□□ -1.9
PHOX2BQ99453 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
PHOX2BQ99453 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.19□□□□□ -1.9
PHOX2BQ99453 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
PHOX2BQ99453 AC008133.2-201ENST00000624540 351 ntBASIC3.19□□□□□ -1.9
PHOX2BQ99453 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PHOX2BQ99453 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 RNU6-1123P-201ENST00000362347 106 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 Y_RNA.226-201ENST00000364337 114 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 Y_RNA.437-201ENST00000384113 113 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 RNU6-360P-201ENST00000390944 104 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 AL591806.2-201ENST00000433122 173 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 AC108210.2-201ENST00000503681 201 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 RNU6-826P-201ENST00000516827 104 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 MIR2276-201ENST00000516886 89 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 RNU6-90P-201ENST00000606352 106 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 RNU6-86P-201ENST00000606534 107 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 AC103810.7-201ENST00000607821 91 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 MIR8065-201ENST00000620577 100 ntBASIC3.18□□□□□ -1.9
PHOX2BQ99453 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.18□□□□□ -1.9
PHOX2BQ99453 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PHOX2BQ99453 Y_RNA.98-201ENST00000363109 102 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 RNU6-1163P-201ENST00000364516 107 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 SNORA7.4-201ENST00000384249 137 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 RNY1P4-201ENST00000384595 115 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 RNU6-482P-201ENST00000391068 107 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 HMGN1P33-201ENST00000432945 451 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 RPS12P2-201ENST00000439728 269 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 RNA5SP24-201ENST00000516478 95 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 RNU6-579P-201ENST00000516879 102 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 MIR4764-201ENST00000580680 88 ntBASIC3.17□□□□□ -1.9
PHOX2BQ99453 SNORD56.3-201ENST00000363507 71 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 RNU1-138P-201ENST00000384093 164 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 RNU6-342P-201ENST00000384521 104 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 RNU6-602P-201ENST00000411155 105 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 RNA5SP270-201ENST00000411361 118 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 RNU6-322P-201ENST00000516010 103 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 RNU7-79P-201ENST00000516082 62 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 RNU6-267P-201ENST00000516714 103 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 AC104027.1-201ENST00000521887 300 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 SNORD14A-201ENST00000606526 91 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.16□□□□□ -1.9
PHOX2BQ99453 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
PHOX2BQ99453 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
PHOX2BQ99453 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.15□□□□□ -1.9
PHOX2BQ99453 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
PHOX2BQ99453 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PHOX2BQ99453 Y_RNA.118-201ENST00000363300 101 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 Y_RNA.244-201ENST00000364484 109 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 RNU6-24P-201ENST00000384440 107 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 Y_RNA.567-201ENST00000384736 106 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 MIR520C-201ENST00000385005 87 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 MIR548G-201ENST00000408442 89 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.15□□□□□ -1.91
PHOX2BQ99453 AC234781.5-201ENST00000508429 271 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 AC019288.1-201ENST00000557918 224 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 SNORD53-201ENST00000579969 78 ntBASIC3.15□□□□□ -1.91
PHOX2BQ99453 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PHOX2BQ99453 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PHOX2BQ99453 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PHOX2BQ99453 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
PHOX2BQ99453 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PHOX2BQ99453 RNU6-633P-201ENST00000362612 103 ntBASIC3.14□□□□□ -1.91
PHOX2BQ99453 RNU6-509P-201ENST00000363519 107 ntBASIC3.14□□□□□ -1.91
PHOX2BQ99453 RNU6-457P-201ENST00000363999 107 ntBASIC3.14□□□□□ -1.91
PHOX2BQ99453 RNU6-1296P-201ENST00000383879 107 ntBASIC3.14□□□□□ -1.91
PHOX2BQ99453 Y_RNA.448-201ENST00000384185 108 ntBASIC3.14□□□□□ -1.91
PHOX2BQ99453 MIR196B-201ENST00000384852 84 ntBASIC3.14□□□□□ -1.91
PHOX2BQ99453 MIR1289-2-201ENST00000408360 111 ntBASIC3.14□□□□□ -1.91
PHOX2BQ99453 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.14□□□□□ -1.91
PHOX2BQ99453 DEFB122-202ENST00000569013 197 ntBASIC3.14□□□□□ -1.91
PHOX2BQ99453 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PHOX2BQ99453 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PHOX2BQ99453 AL161431.1-201ENST00000618966 4205 ntBASIC3.13□□□□□ -1.91
PHOX2BQ99453 RNU6-1244P-201ENST00000363614 108 ntBASIC3.13□□□□□ -1.91
PHOX2BQ99453 Y_RNA.247-201ENST00000364500 92 ntBASIC3.13□□□□□ -1.91
PHOX2BQ99453 RNU6-787P-201ENST00000384032 107 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms