Protein–RNA interactions for Protein: Q96RQ1

ERGIC2, Endoplasmic reticulum-Golgi intermediate compartment protein 2, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2Q96RQ1 RNU1-93P-201ENST00000364704 169 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.352-201ENST00000365439 102 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.432-201ENST00000384087 111 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 RNU6-125P-201ENST00000384505 107 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 MT-TT-201ENST00000387460 66 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 AL606845.1-201ENST00000404881 255 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 MIR1827-201ENST00000408549 66 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.638-201ENST00000459374 113 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 AC097639.2-201ENST00000603159 172 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 MIR8055-201ENST00000610739 97 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
ERGIC2Q96RQ1 MIR1-1-201ENST00000362147 71 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 SNORD45.3-201ENST00000363836 72 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 AF228730.3-201ENST00000436691 102 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 RPS29P24-201ENST00000486345 171 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 RNU7-53P-201ENST00000516705 60 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 SNORD36C-201ENST00000516733 66 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 RNU6-453P-201ENST00000516819 85 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 7SK.10-201ENST00000621414 298 ntBASIC0.68□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.47-201ENST00000362697 108 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.91-201ENST00000363042 107 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.149-201ENST00000363558 117 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.622-201ENST00000411091 108 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 AC090844.1-201ENST00000422019 156 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 AC244023.1-201ENST00000426884 112 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 RNA5SP102-201ENST00000516865 106 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 AC004817.2-201ENST00000561794 651 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 AC242498.1-201ENST00000604134 111 ntBASIC0.67□□□□□ -2.3
ERGIC2Q96RQ1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 RNU6-653P-201ENST00000363074 106 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.199-201ENST00000364014 102 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.396-201ENST00000383949 103 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.416-201ENST00000384014 113 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 Y_RNA.459-201ENST00000384251 102 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 SNORD38B-201ENST00000384690 67 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 RNU6-205P-201ENST00000390858 107 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 RNU6-913P-201ENST00000390913 95 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 RNU6-381P-201ENST00000391259 108 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 SNORD99-201ENST00000408612 74 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 AL358176.2-201ENST00000425769 204 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 AC108729.3-201ENST00000513484 108 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 RNU6-237P-201ENST00000515985 71 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 MIR4643-201ENST00000577473 78 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 AC104465.1-201ENST00000611365 139 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 SNORD38B-202ENST00000625943 69 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 Z97988.1-201ENST00000637697 135 ntBASIC0.66□□□□□ -2.3
ERGIC2Q96RQ1 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
ERGIC2Q96RQ1 RNY1P10-201ENST00000363268 113 ntBASIC0.65□□□□□ -2.31
ERGIC2Q96RQ1 RNU6-694P-201ENST00000364071 147 ntBASIC0.65□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.262-201ENST00000364641 102 ntBASIC0.65□□□□□ -2.31
ERGIC2Q96RQ1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
ERGIC2Q96RQ1 RNU6-1189P-201ENST00000383958 107 ntBASIC0.65□□□□□ -2.31
ERGIC2Q96RQ1 RNU7-96P-201ENST00000459535 64 ntBASIC0.65□□□□□ -2.31
ERGIC2Q96RQ1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.65□□□□□ -2.31
ERGIC2Q96RQ1 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
ERGIC2Q96RQ1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 RNU6-934P-201ENST00000365154 107 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 RNU4-17P-201ENST00000365598 141 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.440-201ENST00000384120 114 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 SNORD105-201ENST00000386910 85 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 SNORD77.3-201ENST00000391113 65 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 SNORD127-201ENST00000458892 86 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 RNU6-998P-201ENST00000515894 101 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 AL442067.1-201ENST00000613261 223 ntBASIC0.64□□□□□ -2.31
ERGIC2Q96RQ1 RNU6-369P-201ENST00000362515 102 ntBASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 RNU6-103P-201ENST00000363686 107 ntBASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.277-201ENST00000364754 102 ntBASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 RNU6-728P-201ENST00000365375 104 ntBASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 MIR548H3-201ENST00000408771 118 ntBASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 AC011921.3-201ENST00000605540 361 ntBASIC0.63□□□□□ -2.31
ERGIC2Q96RQ1 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.23-201ENST00000362496 106 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.54-201ENST00000362766 105 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.76-201ENST00000362931 109 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 RNU6-1309P-201ENST00000363305 108 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.292-201ENST00000364904 97 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 SNORA1-201ENST00000384107 130 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.542-201ENST00000384641 111 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 Y_RNA.556-201ENST00000384677 113 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 RNU1-119P-201ENST00000391122 165 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 SNORA79-201ENST00000408376 140 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 RNU4-43P-201ENST00000410628 137 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 RNU7-62P-201ENST00000458856 62 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 RNU2-11P-201ENST00000459191 187 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 snoU13.21-201ENST00000459368 105 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
ERGIC2Q96RQ1 AL360085.1-201ENST00000604713 532 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms