Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNU6-1292P-201ENST00000383856 107 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 SNORA24-201ENST00000384096 131 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.542-201ENST00000384641 111 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 RNU6-460P-201ENST00000391158 108 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 AL603908.1-201ENST00000406098 201 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1□□□□□ -2.25
ZIM3Q96PE6 AC027119.1-201ENST00000440877 241 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 SNORD123-201ENST00000459473 70 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 RNU6-426P-201ENST00000516464 97 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.686-201ENST00000516548 134 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 MIR3646-201ENST00000578301 84 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 MIR548AR-201ENST00000582191 57 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 MIR5197-201ENST00000583721 112 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 MIR3192-201ENST00000584920 77 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 MIR8063-201ENST00000621930 81 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
ZIM3Q96PE6 ICE2P2-201ENST00000483823 2787 ntBASIC1□□□□□ -2.25
ZIM3Q96PE6 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.357-201ENST00000365487 109 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.440-201ENST00000384120 114 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.568-201ENST00000384742 113 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 MIR452-201ENST00000385020 85 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 SNORA75.5-201ENST00000391291 81 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 U8.17-201ENST00000391292 132 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 MIR1302-7-201ENST00000408841 72 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 AC023449.1-201ENST00000454464 154 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.651-201ENST00000459380 103 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 RPS26P48-201ENST00000491713 339 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 RNU7-41P-201ENST00000515917 61 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.703-201ENST00000516846 111 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 SNORA18.7-201ENST00000516910 131 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.99□□□□□ -2.25
ZIM3Q96PE6 AC090049.2-201ENST00000550377 109 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 FAM106DP-201ENST00000586416 501 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 AL096861.1-201ENST00000610899 123 ntBASIC0.99□□□□□ -2.25
ZIM3Q96PE6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
ZIM3Q96PE6 SNORA2.2-201ENST00000365473 135 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 SNORA20-201ENST00000384662 132 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 MIR570-201ENST00000384917 97 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 SNORA26-201ENST00000391286 122 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 RNU6-257P-201ENST00000410238 98 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 RNA5SP127-201ENST00000411051 133 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 AC079140.2-201ENST00000506193 142 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 RNU6-126P-201ENST00000516685 103 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 RNU6-922P-201ENST00000516753 99 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 Y_RNA.714-201ENST00000517065 90 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 SNORA74.3-201ENST00000517108 154 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 AP003716.2-201ENST00000528260 108 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 AC112693.2-201ENST00000556538 232 ntBASIC0.98□□□□□ -2.25
ZIM3Q96PE6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.97□□□□□ -2.25
ZIM3Q96PE6 RNA5SP259-201ENST00000365541 109 ntBASIC0.97□□□□□ -2.25
ZIM3Q96PE6 MIR136-201ENST00000385207 82 ntBASIC0.97□□□□□ -2.25
ZIM3Q96PE6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
ZIM3Q96PE6 snoU13.23-201ENST00000458863 104 ntBASIC0.97□□□□□ -2.25
ZIM3Q96PE6 SNORA25.12-201ENST00000516202 82 ntBASIC0.97□□□□□ -2.25
ZIM3Q96PE6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.97□□□□□ -2.25
ZIM3Q96PE6 AP003484.1-201ENST00000530974 250 ntBASIC0.97□□□□□ -2.25
ZIM3Q96PE6 MIR548X2-201ENST00000579776 100 ntBASIC0.97□□□□□ -2.25
ZIM3Q96PE6 AC134878.1-201ENST00000619901 243 ntBASIC0.97□□□□□ -2.25
ZIM3Q96PE6 MTND1P7-201ENST00000632801 297 ntBASIC0.97□□□□□ -2.25
ZIM3Q96PE6 SNORD115-34-201ENST00000362441 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-12-201ENST00000362583 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-29-201ENST00000362834 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-9-201ENST00000362912 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-21-201ENST00000362963 81 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-14-201ENST00000363090 81 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-13-201ENST00000363358 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-41-201ENST00000363608 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-11-201ENST00000363616 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-5-201ENST00000363633 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-39-201ENST00000363694 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-4-201ENST00000363810 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-16-201ENST00000363887 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-6-201ENST00000363942 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-42-201ENST00000364273 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORA25.7-201ENST00000364375 127 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-15-201ENST00000364809 81 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-1-201ENST00000364961 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-26-201ENST00000365067 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-10-201ENST00000365073 81 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD50.2-201ENST00000365465 70 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-43-201ENST00000365503 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD115-36-201ENST00000365629 82 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.420-201ENST00000384043 110 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORD38C-201ENST00000384381 69 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.521-201ENST00000384560 114 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 RNU6-913P-201ENST00000390913 95 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 Y_RNA.586-201ENST00000391146 98 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 SNORA79-201ENST00000408376 140 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 AP1B1P2-201ENST00000416196 106 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 MTND4LP9-201ENST00000427694 174 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 AC108667.1-201ENST00000428618 249 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 RNU6-1149P-201ENST00000516810 97 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 AC019176.1-201ENST00000518519 225 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.96□□□□□ -2.26
ZIM3Q96PE6 AC015712.3-201ENST00000559380 164 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 AC131055.1-201ENST00000584626 316 ntBASIC0.96□□□□□ -2.26
ZIM3Q96PE6 AP000942.3-201ENST00000603702 160 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 276.9 ms