Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 IGLL4P-201ENST00000614590 133 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 MIR1255B1-201ENST00000636325 63 ntBASIC2.21□□□□□ -2.06
CHFRQ96EP1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHFRQ96EP1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 RNU6-979P-201ENST00000383896 107 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 MIR95-201ENST00000385072 81 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 MIR676-201ENST00000390702 67 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 RNU6-279P-201ENST00000391297 101 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 AL451046.2-201ENST00000403074 277 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 RNU2-48P-201ENST00000410694 191 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 AC096949.1-201ENST00000412047 152 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 BTF3P4-201ENST00000418852 495 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 AC004941.2-201ENST00000427009 228 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 AL445646.1-201ENST00000431784 216 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.2□□□□□ -2.06
CHFRQ96EP1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 RNA5SP137-201ENST00000516833 135 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 AL358944.1-201ENST00000528537 144 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 MIR3683-201ENST00000580847 82 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 AL359075.3-201ENST00000613288 217 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 MIR6132-201ENST00000622083 109 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 AC091932.4-201ENST00000623386 200 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 AC095038.3-201ENST00000634439 195 ntBASIC2.2□□□□□ -2.06
CHFRQ96EP1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHFRQ96EP1 AC005336.3-201ENST00000623833 2679 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 RNU6-832P-201ENST00000363319 107 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 Y_RNA.190-201ENST00000363964 101 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 Y_RNA.242-201ENST00000364473 110 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 RNU4-16P-201ENST00000364737 141 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 Y_RNA.313-201ENST00000365095 103 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 Y_RNA.360-201ENST00000365512 102 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 RNU6-546P-201ENST00000383991 107 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 HMGN2P19-201ENST00000425149 265 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 AC099677.2-201ENST00000436385 175 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 RNU6-267P-201ENST00000516714 103 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 SNORA48.11-201ENST00000517015 89 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 MIR4777-201ENST00000583710 86 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 AL627230.6-201ENST00000611129 280 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 MIR338-201ENST00000636369 67 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 AC091304.10-201ENST00000641554 121 ntBASIC2.19□□□□□ -2.06
CHFRQ96EP1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHFRQ96EP1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
CHFRQ96EP1 RNU1-23P-201ENST00000363361 144 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 Y_RNA.351-201ENST00000365436 96 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 MIR605-201ENST00000385078 83 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 RNU6-402P-201ENST00000410678 103 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 RNU7-70P-201ENST00000516941 66 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.18□□□□□ -2.06
CHFRQ96EP1 MIR4694-201ENST00000578534 80 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 MIR4762-201ENST00000585261 75 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 AL513534.2-201ENST00000603836 250 ntBASIC2.18□□□□□ -2.06
CHFRQ96EP1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CHFRQ96EP1 RNU6-363P-201ENST00000362895 105 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 SNORD115-19-201ENST00000363098 82 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 SNORD115-18-201ENST00000363293 82 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 SNORD115-17-201ENST00000364612 82 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 RNU6-442P-201ENST00000383968 104 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 RNU6-242P-201ENST00000384359 107 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 AL512326.2-201ENST00000426359 151 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 AL049830.1-201ENST00000468034 425 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 RNU6-1041P-201ENST00000516254 102 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 Y_RNA.714-201ENST00000517065 90 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 RNU6-548P-201ENST00000517083 115 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 AP003484.1-201ENST00000530974 250 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 MIR4666B-201ENST00000578142 81 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 MIR5588-201ENST00000581890 63 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 AL353997.5-201ENST00000618886 171 ntBASIC2.17□□□□□ -2.06
CHFRQ96EP1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
CHFRQ96EP1 RNU6-661P-201ENST00000362409 107 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 SNORD68-201ENST00000363214 84 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 U8.5-201ENST00000364528 136 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 RNU6-219P-201ENST00000364728 107 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 SNORD115-35-201ENST00000365122 82 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 SNORA25B-201ENST00000365507 128 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 RNA5SP144-201ENST00000410846 116 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 RPL23AP42-201ENST00000471152 471 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 RPS23P4-201ENST00000487908 423 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 RNU6-857P-201ENST00000515893 110 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 MIR6845-201ENST00000613182 61 ntBASIC2.16□□□□□ -2.06
CHFRQ96EP1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CHFRQ96EP1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
CHFRQ96EP1 Y_RNA.10-201ENST00000362371 110 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 RNA5SP276-201ENST00000362580 94 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 SNORD14E-201ENST00000364009 85 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 RNU6-60P-201ENST00000364792 103 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 RNU6-1296P-201ENST00000383879 107 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 Y_RNA.507-201ENST00000384500 99 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 MIR802-201ENST00000390235 94 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 RNU6-679P-201ENST00000391003 106 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 HMGN2P39-201ENST00000398005 273 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 RNU6-733P-201ENST00000410759 104 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 RNU7-171P-201ENST00000459581 62 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 RNU6-295P-201ENST00000516901 104 ntBASIC2.15□□□□□ -2.07
CHFRQ96EP1 SNORA18.7-201ENST00000516910 131 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms