Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 PCNPP3-201ENST00000393579 471 ntBASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 RPS27P16-201ENST00000425758 201 ntBASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 AP003484.1-201ENST00000530974 250 ntBASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 AL512310.8-201ENST00000550183 120 ntBASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 AL365205.2-201ENST00000594586 68 ntBASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.61□□□□□ -2.15
TRIM43Q96BQ3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 RNU1-93P-201ENST00000364704 169 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.370-201ENST00000365589 108 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 RNU6-597P-201ENST00000365620 102 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 RNU6-209P-201ENST00000384118 107 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 AF228730.3-201ENST00000436691 102 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 RNU6-947P-201ENST00000516264 106 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 SNORA18.4-201ENST00000516440 124 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 MIR3664-201ENST00000579074 99 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 MIR4764-201ENST00000580680 88 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 MIR548AR-201ENST00000582191 57 ntBASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.6□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.180-201ENST00000363867 113 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 RNU6-1292P-201ENST00000383856 107 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 RNU6-768P-201ENST00000384683 107 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 SNORD37.2-201ENST00000391075 66 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 MIR6078-201ENST00000611069 100 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 AC104465.1-201ENST00000611365 139 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 MIR6515-201ENST00000619843 57 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM43Q96BQ3 SNORD115-34-201ENST00000362441 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-12-201ENST00000362583 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-29-201ENST00000362834 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-9-201ENST00000362912 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-21-201ENST00000362963 81 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-14-201ENST00000363090 81 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-13-201ENST00000363358 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-41-201ENST00000363608 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-11-201ENST00000363616 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-5-201ENST00000363633 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-39-201ENST00000363694 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-4-201ENST00000363810 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-16-201ENST00000363887 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-6-201ENST00000363942 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-42-201ENST00000364273 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-15-201ENST00000364809 81 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-1-201ENST00000364961 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-26-201ENST00000365067 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-10-201ENST00000365073 81 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-43-201ENST00000365503 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-36-201ENST00000365629 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD28B-201ENST00000390993 75 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD77.3-201ENST00000391113 65 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 RNA5SP127-201ENST00000411051 133 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 RNU7-121P-201ENST00000516604 62 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD36C-201ENST00000516733 66 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 RN7SKP88-201ENST00000516847 250 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 AC090821.2-201ENST00000523552 176 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 AC024614.2-201ENST00000577584 372 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 DNAJC19P2-201ENST00000593340 302 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 AP001485.1-201ENST00000604799 199 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 SNORD115-40-201ENST00000606510 82 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 7SK.8-201ENST00000612110 250 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 7SK.11-201ENST00000615477 250 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 7SK.13-201ENST00000622040 250 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 MIR6844-201ENST00000637122 62 ntBASIC1.58□□□□□ -2.16
TRIM43Q96BQ3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 RNU6-449P-201ENST00000383914 107 ntBASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 SNORA70.7-201ENST00000384159 133 ntBASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 MIR520E-201ENST00000384867 87 ntBASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 SNORA40.5-201ENST00000391061 128 ntBASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 SNORA75.5-201ENST00000391291 81 ntBASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 MIR3646-201ENST00000578301 84 ntBASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 AC008133.2-201ENST00000624540 351 ntBASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TRIM43Q96BQ3 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
TRIM43Q96BQ3 SNORA27-201ENST00000384323 126 ntBASIC1.56□□□□□ -2.16
TRIM43Q96BQ3 MT-TR-201ENST00000387439 65 ntBASIC1.56□□□□□ -2.16
TRIM43Q96BQ3 RNU6-938P-201ENST00000411285 103 ntBASIC1.56□□□□□ -2.16
TRIM43Q96BQ3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.56□□□□□ -2.16
TRIM43Q96BQ3 Y_RNA.8-201ENST00000362353 102 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 RNA5SP48-201ENST00000363969 126 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 SNORD116-18-201ENST00000383961 92 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 Y_RNA.464-201ENST00000384282 110 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 SNORA51.10-201ENST00000384418 136 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 MIR624-201ENST00000385217 97 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 RNU6-394P-201ENST00000410735 107 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 RPS26P48-201ENST00000491713 339 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 MIR3144-201ENST00000579460 79 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 MIR5197-201ENST00000583721 112 ntBASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.55□□□□□ -2.16
TRIM43Q96BQ3 SNORD114-27-201ENST00000363766 70 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms