Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 SNORA1.2-201ENST00000365189 134 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 Y_RNA.369-201ENST00000365568 117 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 AL022718.1-201ENST00000412004 84 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 RNU6-109P-201ENST00000516364 107 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 RNU6-184P-201ENST00000516514 107 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 RNA5SP481-201ENST00000516814 122 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 AC121758.2-201ENST00000553271 193 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 MIR548AR-201ENST00000582191 57 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 SNORD3E-202ENST00000627253 216 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 AL162726.3-218ENST00000636401 95 ntBASIC2.79□□□□□ -1.96
VTI1AQ96AJ9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 Y_RNA.171-201ENST00000363760 102 ntBASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 Y_RNA.531-201ENST00000384589 121 ntBASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 SNORD123-201ENST00000459473 70 ntBASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 AC107297.1-201ENST00000459991 176 ntBASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 RPS23P4-201ENST00000487908 423 ntBASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 RNU6-958P-201ENST00000516995 106 ntBASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 AL513534.2-201ENST00000603836 250 ntBASIC2.78□□□□□ -1.96
VTI1AQ96AJ9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.97
VTI1AQ96AJ9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 SNORA24-201ENST00000384096 131 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 RNU6-1113P-201ENST00000384348 107 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 RNU6-1319P-201ENST00000390855 104 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 RNU6-747P-201ENST00000390928 104 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 RNA5SP210-201ENST00000391034 120 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 RNU6-241P-201ENST00000391148 104 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 RN7SKP223-201ENST00000410582 62 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 RNU6-1190P-201ENST00000410811 104 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 RNU6-177P-201ENST00000411257 104 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 AC234781.5-201ENST00000508429 271 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.77□□□□□ -1.97
VTI1AQ96AJ9 MIR6073-201ENST00000352083 89 ntBASIC2.76□□□□□ -1.97
VTI1AQ96AJ9 MIR424-201ENST00000362227 98 ntBASIC2.76□□□□□ -1.97
VTI1AQ96AJ9 RNU6-457P-201ENST00000363999 107 ntBASIC2.76□□□□□ -1.97
VTI1AQ96AJ9 AL359511.1-201ENST00000402970 211 ntBASIC2.76□□□□□ -1.97
VTI1AQ96AJ9 RPS29P29-201ENST00000456396 171 ntBASIC2.76□□□□□ -1.97
VTI1AQ96AJ9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.76□□□□□ -1.97
VTI1AQ96AJ9 SNORA31.17-201ENST00000516953 127 ntBASIC2.76□□□□□ -1.97
VTI1AQ96AJ9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.76□□□□□ -1.97
VTI1AQ96AJ9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
VTI1AQ96AJ9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 RNA5SP456-201ENST00000364002 114 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 DEFA7P-201ENST00000382676 285 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 RNU6-913P-201ENST00000390913 95 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 RNU6-816P-201ENST00000390914 107 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 RNU6-1268P-201ENST00000391214 107 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 SNORA26.6-201ENST00000391256 115 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 RNU6-1239P-201ENST00000391310 107 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 AL356320.1-201ENST00000429616 163 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 RPL39P25-201ENST00000449384 154 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 RNU7-67P-201ENST00000459003 62 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 AC113410.1-201ENST00000505029 247 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 AC141557.1-201ENST00000540982 400 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 MIR3618-201ENST00000580330 88 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 Y_RNA.773-201ENST00000607168 90 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 MIR6873-201ENST00000622788 63 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 MIR6841-201ENST00000637129 72 ntBASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VTI1AQ96AJ9 SNORA70.7-201ENST00000384159 133 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 Y_RNA.544-201ENST00000384650 113 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 RNA5SP233-201ENST00000459153 113 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 RNU6-904P-201ENST00000516206 101 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 AC015712.3-201ENST00000559380 164 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 MIR4791-201ENST00000607666 84 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 AC046143.2-201ENST00000609789 160 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 MIR6840-201ENST00000611937 71 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 MIR6895-201ENST00000613497 78 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 MIR1255B1-201ENST00000636325 63 ntBASIC2.74□□□□□ -1.97
VTI1AQ96AJ9 Y_RNA.78-201ENST00000362970 110 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 Y_RNA.470-201ENST00000384307 117 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 RNA5SP212-201ENST00000391223 107 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 MIR1289-2-201ENST00000408360 111 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 RNU7-113P-201ENST00000459273 62 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 AC108210.2-201ENST00000503681 201 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 SNORA40.13-201ENST00000516379 120 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 RNU7-53P-201ENST00000516705 60 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 AC243994.1-201ENST00000618627 109 ntBASIC2.73□□□□□ -1.97
VTI1AQ96AJ9 RNU6-661P-201ENST00000362409 107 ntBASIC2.72□□□□□ -1.97
VTI1AQ96AJ9 RNU6-1131P-201ENST00000364955 107 ntBASIC2.72□□□□□ -1.97
VTI1AQ96AJ9 AL591806.2-201ENST00000433122 173 ntBASIC2.72□□□□□ -1.97
VTI1AQ96AJ9 snoU13.23-201ENST00000458863 104 ntBASIC2.72□□□□□ -1.97
VTI1AQ96AJ9 DEFB122-202ENST00000569013 197 ntBASIC2.72□□□□□ -1.97
VTI1AQ96AJ9 FAM106DP-201ENST00000586416 501 ntBASIC2.72□□□□□ -1.97
VTI1AQ96AJ9 SNORA22.1-201ENST00000362701 134 ntBASIC2.71□□□□□ -1.98
VTI1AQ96AJ9 SNORD115-19-201ENST00000363098 82 ntBASIC2.71□□□□□ -1.98
VTI1AQ96AJ9 SNORD115-18-201ENST00000363293 82 ntBASIC2.71□□□□□ -1.98
VTI1AQ96AJ9 SNORD115-17-201ENST00000364612 82 ntBASIC2.71□□□□□ -1.98
VTI1AQ96AJ9 MIR488-201ENST00000365739 83 ntBASIC2.71□□□□□ -1.98
VTI1AQ96AJ9 RNU6-49P-201ENST00000384256 107 ntBASIC2.71□□□□□ -1.98
VTI1AQ96AJ9 MIR1912-201ENST00000410389 80 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 537.6 ms