Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC006441.5-201ENST00000612680 209 ntBASIC1.1□□□□□ -2.23
RFT1Q96AA3 AL353997.5-201ENST00000618886 171 ntBASIC1.1□□□□□ -2.23
RFT1Q96AA3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.1□□□□□ -2.23
RFT1Q96AA3 MTND1P7-201ENST00000632801 297 ntBASIC1.1□□□□□ -2.23
RFT1Q96AA3 U2.22-201ENST00000636441 106 ntBASIC1.1□□□□□ -2.23
RFT1Q96AA3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RFT1Q96AA3 SNORD14E-201ENST00000364009 85 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 RNU6-704P-201ENST00000364162 103 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 Y_RNA.294-201ENST00000364916 102 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 SNORD24-201ENST00000383884 75 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 Y_RNA.420-201ENST00000384043 110 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 Y_RNA.542-201ENST00000384641 111 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
RFT1Q96AA3 Y_RNA.586-201ENST00000391146 98 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 MTND4LP9-201ENST00000427694 174 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 AC245047.7-201ENST00000440265 293 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 AL392103.1-201ENST00000447000 198 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 RPS29P29-201ENST00000456396 171 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 SNORA31.4-201ENST00000516049 129 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 RNU6-365P-201ENST00000517113 106 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 MIR4662B-201ENST00000579498 81 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 AC087685.1-201ENST00000587507 141 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 MIR6715A-201ENST00000615929 79 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 AC015726.2-201ENST00000620112 122 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 MIR6844-201ENST00000637122 62 ntBASIC1.09□□□□□ -2.23
RFT1Q96AA3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.24
RFT1Q96AA3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.08□□□□□ -2.24
RFT1Q96AA3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 MIR764-201ENST00000390811 85 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 SNORD37.2-201ENST00000391075 66 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 SNORA17.3-201ENST00000391159 129 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 SNORA75.5-201ENST00000391291 81 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.08□□□□□ -2.24
RFT1Q96AA3 AC023449.1-201ENST00000454464 154 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.08□□□□□ -2.24
RFT1Q96AA3 RNU4-57P-201ENST00000515980 135 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 FAM106DP-201ENST00000586416 501 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 AL365205.2-201ENST00000594586 68 ntBASIC1.08□□□□□ -2.24
RFT1Q96AA3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RFT1Q96AA3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.07□□□□□ -2.24
RFT1Q96AA3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RFT1Q96AA3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.07□□□□□ -2.24
RFT1Q96AA3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RFT1Q96AA3 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 RNU6-442P-201ENST00000383968 104 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 MIR613-201ENST00000385248 95 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 SNORD28B-201ENST00000390993 75 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 SNORA79-201ENST00000408376 140 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 RPL39P39-201ENST00000455840 151 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 SNORD111.1-201ENST00000516421 86 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 RNU6-504P-201ENST00000516568 104 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 SCARNA15-202ENST00000516881 127 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 RNU7-181P-201ENST00000517234 74 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 MIR4524B-201ENST00000581569 115 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
RFT1Q96AA3 AC010332.2-201ENST00000613083 1904 ntBASIC1.07□□□□□ -2.24
RFT1Q96AA3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.06□□□□□ -2.24
RFT1Q96AA3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.06□□□□□ -2.24
RFT1Q96AA3 Y_RNA.525-201ENST00000384570 113 ntBASIC1.06□□□□□ -2.24
RFT1Q96AA3 SNORA19-201ENST00000384737 128 ntBASIC1.06□□□□□ -2.24
RFT1Q96AA3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
RFT1Q96AA3 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
RFT1Q96AA3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.06□□□□□ -2.24
RFT1Q96AA3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.06□□□□□ -2.24
RFT1Q96AA3 RNU6-971P-201ENST00000516920 106 ntBASIC1.06□□□□□ -2.24
RFT1Q96AA3 SNORA70.22-201ENST00000517160 124 ntBASIC1.06□□□□□ -2.24
RFT1Q96AA3 MIR3646-201ENST00000578301 84 ntBASIC1.06□□□□□ -2.24
RFT1Q96AA3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
RFT1Q96AA3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.05□□□□□ -2.24
RFT1Q96AA3 SNORD115-28-201ENST00000363931 81 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 Y_RNA.218-201ENST00000364218 104 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 SNORA25.7-201ENST00000364375 127 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 RNU6-309P-201ENST00000364573 106 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 SNORD50.2-201ENST00000365465 70 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 MIR570-201ENST00000384917 97 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 MIR624-201ENST00000385217 97 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 MIR802-201ENST00000390235 94 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 SNORA40.6-201ENST00000391153 128 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 RNU4-62P-201ENST00000410125 130 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.05□□□□□ -2.24
RFT1Q96AA3 HMGN2P32-201ENST00000444648 269 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 TMSB4XP3-201ENST00000445144 114 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 Y_RNA.651-201ENST00000459380 103 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 RNA5SP236-201ENST00000516169 116 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 MIR4421-201ENST00000578133 69 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 AL096861.1-201ENST00000610899 123 ntBASIC1.05□□□□□ -2.24
RFT1Q96AA3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
RFT1Q96AA3 RNU6-915P-201ENST00000364943 103 ntBASIC1.04□□□□□ -2.24
RFT1Q96AA3 SNORD113-1-201ENST00000365321 69 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms