Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 Y_RNA.213-201ENST00000364178 111 ntBASIC2.25□□□□□ -2.05
BRF1Q92994 MIR194-1-201ENST00000384892 85 ntBASIC2.25□□□□□ -2.05
BRF1Q92994 RNU7-164P-201ENST00000459221 62 ntBASIC2.25□□□□□ -2.05
BRF1Q92994 RNU1-41P-201ENST00000516161 162 ntBASIC2.25□□□□□ -2.05
BRF1Q92994 RNU1-48P-201ENST00000516400 162 ntBASIC2.25□□□□□ -2.05
BRF1Q92994 MIR4513-201ENST00000581077 86 ntBASIC2.25□□□□□ -2.05
BRF1Q92994 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.25□□□□□ -2.05
BRF1Q92994 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 MIR342-201ENST00000362212 99 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 RNY4P6-201ENST00000363667 96 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 SNORA70.7-201ENST00000384159 133 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 SNX2P2-201ENST00000424553 323 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 RNU2-11P-201ENST00000459191 187 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 SNORD123-201ENST00000459473 70 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 UBL5P3-201ENST00000475112 231 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 SUMO2P16-201ENST00000519475 264 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 MIR4448-201ENST00000584360 86 ntBASIC2.24□□□□□ -2.05
BRF1Q92994 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
BRF1Q92994 MIR302B-201ENST00000362188 73 ntBASIC2.23□□□□□ -2.05
BRF1Q92994 RNU6-457P-201ENST00000363999 107 ntBASIC2.23□□□□□ -2.05
BRF1Q92994 RNU4-52P-201ENST00000384209 138 ntBASIC2.23□□□□□ -2.05
BRF1Q92994 SNORA70B-201ENST00000384210 135 ntBASIC2.23□□□□□ -2.05
BRF1Q92994 MIR759-201ENST00000390224 91 ntBASIC2.23□□□□□ -2.05
BRF1Q92994 RNU7-123P-201ENST00000515911 60 ntBASIC2.23□□□□□ -2.05
BRF1Q92994 MIR548AR-201ENST00000582191 57 ntBASIC2.23□□□□□ -2.05
BRF1Q92994 HSPE1P19-201ENST00000603327 295 ntBASIC2.23□□□□□ -2.05
BRF1Q92994 AC021613.1-201ENST00000623880 111 ntBASIC2.23□□□□□ -2.05
BRF1Q92994 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
BRF1Q92994 RNU6-203P-201ENST00000384038 104 ntBASIC2.22□□□□□ -2.05
BRF1Q92994 RPS29P29-201ENST00000456396 171 ntBASIC2.22□□□□□ -2.05
BRF1Q92994 RNU2-35P-201ENST00000516446 142 ntBASIC2.22□□□□□ -2.05
BRF1Q92994 RNA5SP364-201ENST00000516938 78 ntBASIC2.22□□□□□ -2.05
BRF1Q92994 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
BRF1Q92994 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
BRF1Q92994 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
BRF1Q92994 AC092881.1-201ENST00000638218 2733 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
BRF1Q92994 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
BRF1Q92994 Y_RNA.85-201ENST00000363014 111 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 Y_RNA.537-201ENST00000384626 109 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 RNU6-1319P-201ENST00000390855 104 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 RNU6-747P-201ENST00000390928 104 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 RNU6-241P-201ENST00000391148 104 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 SUMO2P12-201ENST00000405924 140 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 RNA5SP144-201ENST00000410846 116 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 RNU6-177P-201ENST00000411257 104 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 AL161935.2-201ENST00000414627 60 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 AC003989.2-201ENST00000440224 169 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 RNA5SP57-201ENST00000459463 123 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 RNU7-53P-201ENST00000516705 60 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 SNORA74.3-201ENST00000517108 154 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 AL773524.1-201ENST00000614065 229 ntBASIC2.21□□□□□ -2.06
BRF1Q92994 SNORD12C-201ENST00000386307 89 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 MT-TI-201ENST00000387365 69 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 SNORD28B-201ENST00000390993 75 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 RNA5SP489-201ENST00000410986 109 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 AC004965.1-201ENST00000413033 213 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 RNU7-73P-201ENST00000458743 63 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 AC022254.1-201ENST00000567857 235 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 FAM106DP-201ENST00000586416 501 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 ZNF355P-201ENST00000427301 3216 ntBASIC2.2□□□□□ -2.06
BRF1Q92994 RNU6-661P-201ENST00000362409 107 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 SNORA16B-201ENST00000364674 135 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 RNU4-16P-201ENST00000364737 141 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 RNU6-1107P-201ENST00000364817 104 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 RNU6-147P-201ENST00000383983 107 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 RNU6-1104P-201ENST00000384723 104 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 RNU6-1067P-201ENST00000384752 107 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 RNU6-893P-201ENST00000458841 100 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 RNU7-67P-201ENST00000459003 62 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 MIR514B-201ENST00000516774 80 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.19□□□□□ -2.06
BRF1Q92994 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.19□□□□□ -2.06
BRF1Q92994 AC243994.1-201ENST00000618627 109 ntBASIC2.19□□□□□ -2.06
BRF1Q92994 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.19□□□□□ -2.06
BRF1Q92994 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
BRF1Q92994 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
BRF1Q92994 RNA5SP276-201ENST00000362580 94 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 Y_RNA.549-201ENST00000384657 102 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 MIR653-201ENST00000385279 96 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 RNA5SP261-201ENST00000410536 106 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 AL022718.1-201ENST00000412004 84 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 AC244636.1-201ENST00000421152 228 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 JTBP1-201ENST00000441314 247 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 RNU6-917P-201ENST00000516294 104 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 RNU6-958P-201ENST00000516995 106 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.18□□□□□ -2.06
BRF1Q92994 MIR3152-201ENST00000579801 74 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 MIR3613-201ENST00000579844 87 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 MIR3163-201ENST00000581592 73 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 MIR4791-201ENST00000607666 84 ntBASIC2.18□□□□□ -2.06
BRF1Q92994 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
BRF1Q92994 SNORA16.1-201ENST00000364597 132 ntBASIC2.17□□□□□ -2.06
BRF1Q92994 Y_RNA.362-201ENST00000365518 110 ntBASIC2.17□□□□□ -2.06
BRF1Q92994 POLR2J4-204ENST00000418424 324 ntBASIC2.17□□□□□ -2.06
BRF1Q92994 RPL23AP6-201ENST00000446637 472 ntBASIC2.17□□□□□ -2.06
BRF1Q92994 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
BRF1Q92994 RPS29P11-201ENST00000496507 171 ntBASIC2.17□□□□□ -2.06
BRF1Q92994 RNU7-43P-201ENST00000516554 64 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms