Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORD115-43-201ENST00000365503 82 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 SNORD115-36-201ENST00000365629 82 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 MIRLET7B-201ENST00000385140 83 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 SNORD115-40-201ENST00000606510 82 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 AC005014.2-201ENST00000607795 599 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 AC024614.3-201ENST00000637860 256 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 MIR30D-201ENST00000362283 70 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 RNU6-702P-201ENST00000364982 107 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 SNORA26.6-201ENST00000391256 115 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 AC006210.1-201ENST00000424882 111 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.12□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 U8.6-201ENST00000364939 135 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 SNORD38B-201ENST00000384690 67 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 SNORA75.4-201ENST00000391278 119 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU6-264P-201ENST00000517134 104 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC006157.1-201ENST00000611750 366 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC068137.3-201ENST00000639191 341 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 BX276092.1-201ENST00000427368 251 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 SNORD11-201ENST00000459124 84 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RPS29P24-201ENST00000486345 171 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU6-155P-201ENST00000516347 100 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 MIR8055-201ENST00000610739 97 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC105081.1-201ENST00000617727 106 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 SNORD115-24-201ENST00000363528 82 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU7-73P-201ENST00000458743 63 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU6-956P-201ENST00000458868 103 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 SNORD54-201ENST00000459159 67 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC010424.1-201ENST00000506336 297 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC010598.1-201ENST00000510378 103 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC005899.2-201ENST00000584353 90 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AL365205.2-201ENST00000594586 68 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC073869.9-201ENST00000641610 120 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 DLGAP5P1-201ENST00000430307 464 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU6-765P-201ENST00000516916 99 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AL512360.1-201ENST00000555346 234 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 MIR3942-201ENST00000585264 109 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RPL21P38-201ENST00000418090 167 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU6-135P-201ENST00000516769 101 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC024405.2-202ENST00000532731 184 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AP001282.2-201ENST00000616149 309 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 UBE2WP1-201ENST00000362030 340 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU6-324P-201ENST00000363957 106 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 RNU1-141P-201ENST00000364623 158 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 MIR215-201ENST00000384858 110 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 CHEK2P4-201ENST00000450340 246 ntBASIC-0.13□□□□□ -2.43
SYNE1Q8NF91 AC009161.1-201ENST00000417306 376 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC087499.4-201ENST00000448505 178 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RPL39P34-201ENST00000477141 156 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RPL7P42-201ENST00000481005 679 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RN7SKP19-201ENST00000516016 252 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC015540.1-201ENST00000615828 501 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 SNORA51.5-201ENST00000384126 131 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-306P-201ENST00000384617 107 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-95P-201ENST00000384697 107 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR190B-201ENST00000401119 79 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR101-2-201ENST00000362195 79 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR9-2-201ENST00000384838 87 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-437P-201ENST00000459408 95 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU1-54P-201ENST00000517181 120 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MTND5P34-201ENST00000568888 325 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC093424.1-201ENST00000604999 338 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU4-10P-201ENST00000364383 140 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 SNORA63C-201ENST00000364578 129 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU7-79P-201ENST00000516082 62 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 MIR4790-201ENST00000577799 79 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AL121655.1-201ENST00000605811 308 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 AC011476.5-201ENST00000615594 130 ntBASIC-0.14□□□□□ -2.43
SYNE1Q8NF91 RNU6-502P-201ENST00000362419 108 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms