Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNA5SP136-201ENST00000410906 107 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 RPS29P29-201ENST00000456396 171 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.95□□□□□ -2.1
HIPK4Q8NE63 MTND5P34-201ENST00000568888 325 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 AC015688.6-201ENST00000577737 104 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 AC021443.1-201ENST00000604478 211 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 AL670379.3-201ENST00000605040 251 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 AC103810.8-201ENST00000607347 118 ntBASIC1.95□□□□□ -2.1
HIPK4Q8NE63 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.95□□□□□ -2.1
HIPK4Q8NE63 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.95□□□□□ -2.1
HIPK4Q8NE63 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HIPK4Q8NE63 AC092881.1-201ENST00000638218 2733 ntBASIC1.94□□□□□ -2.1
HIPK4Q8NE63 Y_RNA.81-201ENST00000362997 102 ntBASIC1.94□□□□□ -2.1
HIPK4Q8NE63 RNA5SP259-201ENST00000365541 109 ntBASIC1.94□□□□□ -2.1
HIPK4Q8NE63 SNORA70.7-201ENST00000384159 133 ntBASIC1.94□□□□□ -2.1
HIPK4Q8NE63 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.94□□□□□ -2.1
HIPK4Q8NE63 UBL5P3-201ENST00000475112 231 ntBASIC1.94□□□□□ -2.1
HIPK4Q8NE63 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.94□□□□□ -2.1
HIPK4Q8NE63 RNY4P20-201ENST00000516678 93 ntBASIC1.94□□□□□ -2.1
HIPK4Q8NE63 MIR4791-201ENST00000607666 84 ntBASIC1.94□□□□□ -2.1
HIPK4Q8NE63 AC243994.1-201ENST00000618627 109 ntBASIC1.94□□□□□ -2.1
HIPK4Q8NE63 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HIPK4Q8NE63 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
HIPK4Q8NE63 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HIPK4Q8NE63 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.93□□□□□ -2.1
HIPK4Q8NE63 MIR302B-201ENST00000362188 73 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 Y_RNA.298-201ENST00000364960 107 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 Y_RNA.537-201ENST00000384626 109 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 RNU7-67P-201ENST00000459003 62 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 RNU7-45P-201ENST00000459460 63 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 RNU6-919P-201ENST00000516731 104 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 RNU6-958P-201ENST00000516995 106 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 MIR4305-201ENST00000583252 102 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 MIR8074-201ENST00000615081 81 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 AC021613.1-201ENST00000623880 111 ntBASIC1.93□□□□□ -2.1
HIPK4Q8NE63 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HIPK4Q8NE63 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HIPK4Q8NE63 MIR548A3-201ENST00000385297 97 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 RNU6-913P-201ENST00000390913 95 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 AL035461.1-201ENST00000421490 332 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 AL356320.1-201ENST00000429616 163 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 Y_RNA.649-201ENST00000459077 103 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 RNU7-164P-201ENST00000459221 62 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 COX6CP6-201ENST00000490840 228 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 RNU7-123P-201ENST00000515911 60 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 RNU2-35P-201ENST00000516446 142 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 RNU7-43P-201ENST00000516554 64 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 RNU7-53P-201ENST00000516705 60 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 MIR4764-201ENST00000580680 88 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 MIR3683-201ENST00000580847 82 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 MIR4513-201ENST00000581077 86 ntBASIC1.92□□□□□ -2.1
HIPK4Q8NE63 SNORD41-201ENST00000386967 70 ntBASIC1.91□□□□□ -2.1
HIPK4Q8NE63 RNU7-73P-201ENST00000458743 63 ntBASIC1.91□□□□□ -2.1
HIPK4Q8NE63 RNU6-589P-201ENST00000516485 107 ntBASIC1.91□□□□□ -2.1
HIPK4Q8NE63 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
HIPK4Q8NE63 AL590808.1-201ENST00000618696 141 ntBASIC1.91□□□□□ -2.1
HIPK4Q8NE63 AL121890.5-201ENST00000620848 304 ntBASIC1.91□□□□□ -2.1
HIPK4Q8NE63 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.91□□□□□ -2.1
HIPK4Q8NE63 RNU6-44P-201ENST00000384045 107 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 MT-TI-201ENST00000387365 69 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 SNORA26.6-201ENST00000391256 115 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 RNA5SP425-201ENST00000410336 112 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 RNU6-1190P-201ENST00000410811 104 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 RNA5SP144-201ENST00000410846 116 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 MTATP6P29-201ENST00000415057 132 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 RNU6-322P-201ENST00000516010 103 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 AC008133.2-201ENST00000624540 351 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 AC064859.1-201ENST00000624741 174 ntBASIC1.9□□□□□ -2.11
HIPK4Q8NE63 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
HIPK4Q8NE63 AL391516.1-201ENST00000554380 2449 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 Y_RNA.198-201ENST00000364013 98 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 SNORA51.10-201ENST00000384418 136 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 SNORD116-21-201ENST00000384507 92 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 MIR520C-201ENST00000385005 87 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 MIR548A1-201ENST00000385041 97 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 RNU6-1319P-201ENST00000390855 104 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 RNU6-747P-201ENST00000390928 104 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 RNY4P18-201ENST00000391107 89 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 RNU6-241P-201ENST00000391148 104 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 AL451046.2-201ENST00000403074 277 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 RNU6-177P-201ENST00000411257 104 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 POLR2J4-204ENST00000418424 324 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
HIPK4Q8NE63 HMGN2P23-201ENST00000456759 269 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 Y_RNA.709-201ENST00000516952 92 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 AL020996.3-201ENST00000606617 222 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
HIPK4Q8NE63 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.89□□□□□ -2.11
HIPK4Q8NE63 MIR302D-201ENST00000362275 68 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 Y_RNA.35-201ENST00000362601 101 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 RNU6-1104P-201ENST00000384723 104 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 RNU6-1067P-201ENST00000384752 107 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 AL023284.1-201ENST00000403956 276 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 AC005908.1-201ENST00000468701 347 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 RNU6-922P-201ENST00000516753 99 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 RNU6-250P-201ENST00000516958 103 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 IGKV3-31-201ENST00000523109 329 ntBASIC1.88□□□□□ -2.11
HIPK4Q8NE63 AC022523.2-201ENST00000561045 150 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms