Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.18
VPS52Q8N1B4 SNORD114-22-201ENST00000365423 72 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 RNU6-597P-201ENST00000365620 102 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 MIR520C-201ENST00000385005 87 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 SNORD77.3-201ENST00000391113 65 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 PCNPP3-201ENST00000393579 471 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 RNU6-1135P-201ENST00000411083 103 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 AC006461.1-201ENST00000412637 326 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 RNU7-121P-201ENST00000516604 62 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 CYP3A52P-201ENST00000563326 91 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
VPS52Q8N1B4 SNORD115-34-201ENST00000362441 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-12-201ENST00000362583 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-29-201ENST00000362834 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-9-201ENST00000362912 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-21-201ENST00000362963 81 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-14-201ENST00000363090 81 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-13-201ENST00000363358 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-41-201ENST00000363608 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-11-201ENST00000363616 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-5-201ENST00000363633 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-39-201ENST00000363694 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-4-201ENST00000363810 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-16-201ENST00000363887 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-6-201ENST00000363942 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-42-201ENST00000364273 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-15-201ENST00000364809 81 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-1-201ENST00000364961 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-26-201ENST00000365067 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-10-201ENST00000365073 81 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-43-201ENST00000365503 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.370-201ENST00000365589 108 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-36-201ENST00000365629 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORA24-201ENST00000384096 131 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.537-201ENST00000384626 109 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.555-201ENST00000384673 110 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 RNU6-239P-201ENST00000390990 99 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORA40.5-201ENST00000391061 128 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORA40.6-201ENST00000391153 128 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 snoU13.25-201ENST00000458945 104 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 RN7SKP88-201ENST00000516847 250 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 AP003484.1-201ENST00000530974 250 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 MIR3192-201ENST00000584920 77 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 SNORD115-40-201ENST00000606510 82 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 7SK.8-201ENST00000612110 250 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 7SK.11-201ENST00000615477 250 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 7SK.13-201ENST00000622040 250 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 AC008133.2-201ENST00000624540 351 ntBASIC1.39□□□□□ -2.19
VPS52Q8N1B4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
VPS52Q8N1B4 RNU6-886P-201ENST00000384319 105 ntBASIC1.38□□□□□ -2.19
VPS52Q8N1B4 RPL39P39-201ENST00000455840 151 ntBASIC1.38□□□□□ -2.19
VPS52Q8N1B4 AC074198.2-201ENST00000508153 258 ntBASIC1.38□□□□□ -2.19
VPS52Q8N1B4 RNU7-41P-201ENST00000515917 61 ntBASIC1.38□□□□□ -2.19
VPS52Q8N1B4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS52Q8N1B4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.38□□□□□ -2.19
VPS52Q8N1B4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
VPS52Q8N1B4 MIR96-201ENST00000362288 78 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.337-201ENST00000365312 102 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.357-201ENST00000365487 109 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.393-201ENST00000383936 102 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.494-201ENST00000384432 111 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 MIR624-201ENST00000385217 97 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS52Q8N1B4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.37□□□□□ -2.19
VPS52Q8N1B4 RPS26P48-201ENST00000491713 339 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.37□□□□□ -2.19
VPS52Q8N1B4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 SNORA18.4-201ENST00000516440 124 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 SNORD36C-201ENST00000516733 66 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 AP003716.2-201ENST00000528260 108 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 MIR3129-201ENST00000581095 76 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 MIR5197-201ENST00000583721 112 ntBASIC1.37□□□□□ -2.19
VPS52Q8N1B4 RNA5SP48-201ENST00000363969 126 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.241-201ENST00000364470 117 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 RNU6-1189P-201ENST00000383958 107 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 SNORA70.7-201ENST00000384159 133 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 AL133373.1-201ENST00000497098 94 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 AL078603.1-201ENST00000603824 313 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 MIR4791-201ENST00000607666 84 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 MIR376A2-201ENST00000636782 80 ntBASIC1.36□□□□□ -2.19
VPS52Q8N1B4 SNORA25.7-201ENST00000364375 127 ntBASIC1.35□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.270-201ENST00000364693 104 ntBASIC1.35□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.272-201ENST00000364696 102 ntBASIC1.35□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.440-201ENST00000384120 114 ntBASIC1.35□□□□□ -2.19
VPS52Q8N1B4 RNU6-768P-201ENST00000384683 107 ntBASIC1.35□□□□□ -2.19
VPS52Q8N1B4 RNA5SP127-201ENST00000411051 133 ntBASIC1.35□□□□□ -2.19
VPS52Q8N1B4 AC245047.7-201ENST00000440265 293 ntBASIC1.35□□□□□ -2.19
VPS52Q8N1B4 AC090821.2-201ENST00000523552 176 ntBASIC1.35□□□□□ -2.19
VPS52Q8N1B4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.35□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.150-201ENST00000363562 102 ntBASIC1.34□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.180-201ENST00000363867 113 ntBASIC1.34□□□□□ -2.19
VPS52Q8N1B4 SNORA27-201ENST00000384323 126 ntBASIC1.34□□□□□ -2.19
VPS52Q8N1B4 Y_RNA.521-201ENST00000384560 114 ntBASIC1.34□□□□□ -2.19
VPS52Q8N1B4 RNU6-394P-201ENST00000410735 107 ntBASIC1.34□□□□□ -2.19
VPS52Q8N1B4 AC107297.1-201ENST00000459991 176 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms