Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 SNORA31.25-201ENST00000517242 134 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 DEFB131E-201ENST00000532329 154 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 AC087741.2-201ENST00000619415 172 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 AC095038.3-201ENST00000634439 195 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 MIR2052-201ENST00000636055 55 ntBASIC2.78□□□□□ -1.96
SIX5Q8N196 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SIX5Q8N196 SNORD115-19-201ENST00000363098 82 ntBASIC2.77□□□□□ -1.97
SIX5Q8N196 SNORD115-18-201ENST00000363293 82 ntBASIC2.77□□□□□ -1.97
SIX5Q8N196 SNORD115-17-201ENST00000364612 82 ntBASIC2.77□□□□□ -1.97
SIX5Q8N196 Z98742.3-201ENST00000418637 326 ntBASIC2.77□□□□□ -1.97
SIX5Q8N196 RNU2-13P-201ENST00000515909 113 ntBASIC2.77□□□□□ -1.97
SIX5Q8N196 RNU6-904P-201ENST00000516206 101 ntBASIC2.77□□□□□ -1.97
SIX5Q8N196 RNU7-193P-201ENST00000516723 65 ntBASIC2.77□□□□□ -1.97
SIX5Q8N196 MIR3618-201ENST00000580330 88 ntBASIC2.77□□□□□ -1.97
SIX5Q8N196 AC103810.6-201ENST00000606708 136 ntBASIC2.77□□□□□ -1.97
SIX5Q8N196 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.77□□□□□ -1.97
SIX5Q8N196 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SIX5Q8N196 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.77□□□□□ -1.97
SIX5Q8N196 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX5Q8N196 RNU6-457P-201ENST00000363999 107 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 RNU6-1131P-201ENST00000364955 107 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 RNU6-409P-201ENST00000384114 104 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 RNU6-360P-201ENST00000390944 104 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 SNORD88.1-201ENST00000408684 91 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 SUMO1P4-201ENST00000429430 302 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 snoU13.23-201ENST00000458863 104 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 MIR6717-201ENST00000622747 73 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 AC010297.1-201ENST00000623948 149 ntBASIC2.76□□□□□ -1.97
SIX5Q8N196 RNA5SP289-201ENST00000362332 137 ntBASIC2.75□□□□□ -1.97
SIX5Q8N196 RNU6-1123P-201ENST00000362347 106 ntBASIC2.75□□□□□ -1.97
SIX5Q8N196 Y_RNA.10-201ENST00000362371 110 ntBASIC2.75□□□□□ -1.97
SIX5Q8N196 Y_RNA.107-201ENST00000363190 121 ntBASIC2.75□□□□□ -1.97
SIX5Q8N196 AP004217.1-201ENST00000480579 346 ntBASIC2.75□□□□□ -1.97
SIX5Q8N196 SNORA74.3-201ENST00000517108 154 ntBASIC2.75□□□□□ -1.97
SIX5Q8N196 AL020996.3-201ENST00000606617 222 ntBASIC2.75□□□□□ -1.97
SIX5Q8N196 AC245884.12-201ENST00000615364 59 ntBASIC2.75□□□□□ -1.97
SIX5Q8N196 RNA5SP393-201ENST00000363423 117 ntBASIC2.74□□□□□ -1.97
SIX5Q8N196 RNU4-67P-201ENST00000364569 141 ntBASIC2.74□□□□□ -1.97
SIX5Q8N196 RNU6-294P-201ENST00000364999 102 ntBASIC2.74□□□□□ -1.97
SIX5Q8N196 MIR512-1-201ENST00000384913 84 ntBASIC2.74□□□□□ -1.97
SIX5Q8N196 RNU6-733P-201ENST00000410759 104 ntBASIC2.74□□□□□ -1.97
SIX5Q8N196 RNU7-43P-201ENST00000516554 64 ntBASIC2.74□□□□□ -1.97
SIX5Q8N196 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.74□□□□□ -1.97
SIX5Q8N196 MIR1255B1-201ENST00000636325 63 ntBASIC2.74□□□□□ -1.97
SIX5Q8N196 MIR6841-201ENST00000637129 72 ntBASIC2.74□□□□□ -1.97
SIX5Q8N196 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SIX5Q8N196 SNORD115-2-201ENST00000362842 82 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 RNY3P2-201ENST00000362918 102 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 Y_RNA.220-201ENST00000364244 109 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 SNORA67.1-201ENST00000364749 141 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 SNORD115-20-201ENST00000365099 82 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 Y_RNA.430-201ENST00000384081 110 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 MIR524-201ENST00000385242 87 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 RNU6-913P-201ENST00000390913 95 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 SNORA26.6-201ENST00000391256 115 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 AL023284.1-201ENST00000403956 276 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 RNU6-1190P-201ENST00000410811 104 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 RNU4-53P-201ENST00000410828 140 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 RPS3AP1-201ENST00000413190 320 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 snoU13.16-201ENST00000459350 104 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 RNU6-158P-201ENST00000517104 100 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 MIR548AE2-201ENST00000583456 67 ntBASIC2.73□□□□□ -1.97
SIX5Q8N196 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX5Q8N196 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SIX5Q8N196 RNU6-363P-201ENST00000362895 105 ntBASIC2.72□□□□□ -1.97
SIX5Q8N196 SNORD114-30-201ENST00000364448 72 ntBASIC2.72□□□□□ -1.97
SIX5Q8N196 SNORA1.1-201ENST00000364671 133 ntBASIC2.72□□□□□ -1.97
SIX5Q8N196 RNA5SP425-201ENST00000410336 112 ntBASIC2.72□□□□□ -1.97
SIX5Q8N196 AC108210.2-201ENST00000503681 201 ntBASIC2.72□□□□□ -1.97
SIX5Q8N196 RNU6-1258P-201ENST00000516911 111 ntBASIC2.72□□□□□ -1.97
SIX5Q8N196 AC015712.3-201ENST00000559380 164 ntBASIC2.72□□□□□ -1.97
SIX5Q8N196 DEFB122-202ENST00000569013 197 ntBASIC2.72□□□□□ -1.97
SIX5Q8N196 Y_RNA.773-201ENST00000607168 90 ntBASIC2.72□□□□□ -1.97
SIX5Q8N196 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SIX5Q8N196 Y_RNA.93-201ENST00000363066 109 ntBASIC2.71□□□□□ -1.98
SIX5Q8N196 Y_RNA.470-201ENST00000384307 117 ntBASIC2.71□□□□□ -1.98
SIX5Q8N196 MTATP8P2-201ENST00000435212 202 ntBASIC2.71□□□□□ -1.98
SIX5Q8N196 RNU6-322P-201ENST00000516010 103 ntBASIC2.71□□□□□ -1.98
SIX5Q8N196 SCARNA23-201ENST00000516060 130 ntBASIC2.71□□□□□ -1.98
SIX5Q8N196 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.71□□□□□ -1.98
SIX5Q8N196 MIR4694-201ENST00000578534 80 ntBASIC2.71□□□□□ -1.98
SIX5Q8N196 MIR4648-201ENST00000580107 72 ntBASIC2.71□□□□□ -1.98
SIX5Q8N196 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SIX5Q8N196 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SIX5Q8N196 Y_RNA.558-201ENST00000384685 113 ntBASIC2.7□□□□□ -1.98
SIX5Q8N196 MIR1289-2-201ENST00000408360 111 ntBASIC2.7□□□□□ -1.98
SIX5Q8N196 MIR1302-4-201ENST00000408701 150 ntBASIC2.7□□□□□ -1.98
SIX5Q8N196 SNORA7.5-201ENST00000410672 110 ntBASIC2.7□□□□□ -1.98
SIX5Q8N196 AL591806.2-201ENST00000433122 173 ntBASIC2.7□□□□□ -1.98
SIX5Q8N196 AC003982.1-202ENST00000469928 248 ntBASIC2.7□□□□□ -1.98
SIX5Q8N196 AC008133.2-201ENST00000624540 351 ntBASIC2.7□□□□□ -1.98
SIX5Q8N196 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SIX5Q8N196 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIX5Q8N196 SNORA32-201ENST00000384072 121 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 MIR520C-201ENST00000385005 87 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 MIR764-201ENST00000390811 85 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 HMGN1P33-201ENST00000432945 451 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 RNU2-19P-201ENST00000517288 84 ntBASIC2.69□□□□□ -1.98
SIX5Q8N196 MIR4764-201ENST00000580680 88 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms