Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU7-137P-201ENST00000516788 62 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 RNA5SP437-201ENST00000517249 129 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 UBL5P2-201ENST00000583788 219 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 AC012676.2-201ENST00000619258 186 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 MAPK10-266ENST00000641066 6555 ntBASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CCDC116Q8IYX3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 SNORD115-37-201ENST00000363768 82 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 MIR520A-201ENST00000384862 85 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 MIR181B2-201ENST00000385004 89 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-447P-201ENST00000410293 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-1118P-201ENST00000410382 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-1076P-201ENST00000410397 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-355P-201ENST00000410427 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-791P-201ENST00000410467 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-705P-201ENST00000410601 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-1100P-201ENST00000410691 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-860P-201ENST00000410860 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-1217P-201ENST00000411276 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU6-785P-201ENST00000411324 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNU7-48P-201ENST00000458875 63 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RNVU1-2-201ENST00000516326 135 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 RN7SKP57-201ENST00000517248 293 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 U6.90-201ENST00000614007 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 U6.70-201ENST00000620287 104 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 Z97988.1-201ENST00000637697 135 ntBASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CCDC116Q8IYX3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 RNU6-1229P-201ENST00000364295 107 ntBASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 Y_RNA.565-201ENST00000384719 101 ntBASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 RNU6-602P-201ENST00000411155 105 ntBASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 MTND5P40-201ENST00000559945 246 ntBASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 MIR4709-201ENST00000577272 72 ntBASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 AC145423.2-201ENST00000610631 239 ntBASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC116Q8IYX3 SNORA38.1-201ENST00000364172 131 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 SNORA7.4-201ENST00000384249 137 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 MIR1283-2-201ENST00000408621 87 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 AC099513.1-201ENST00000490423 301 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 AC234781.5-201ENST00000508429 271 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 RPL23AP94-201ENST00000512518 302 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 RN7SKP132-201ENST00000516001 208 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 SNORA74.3-201ENST00000517108 154 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 AC140658.3-201ENST00000567603 271 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.95
CCDC116Q8IYX3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 AL161431.1-201ENST00000618966 4205 ntBASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 Y_RNA.98-201ENST00000363109 102 ntBASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 RNU6-480P-201ENST00000384332 107 ntBASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 RNU1-148P-201ENST00000384472 162 ntBASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 SNORA46-201ENST00000384762 135 ntBASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 RN7SL20P-201ENST00000488827 297 ntBASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 AC245166.1-201ENST00000521012 253 ntBASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 MIR3651-201ENST00000630427 90 ntBASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 MIR622-201ENST00000638396 96 ntBASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CCDC116Q8IYX3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC116Q8IYX3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CCDC116Q8IYX3 HMGN2P3-201ENST00000433603 273 ntBASIC2.88□□□□□ -1.95
CCDC116Q8IYX3 HMGN2P5-201ENST00000436882 273 ntBASIC2.88□□□□□ -1.95
CCDC116Q8IYX3 BX510359.1-201ENST00000456973 237 ntBASIC2.88□□□□□ -1.95
CCDC116Q8IYX3 CYP3A52P-201ENST00000563326 91 ntBASIC2.88□□□□□ -1.95
CCDC116Q8IYX3 AC008133.2-201ENST00000624540 351 ntBASIC2.88□□□□□ -1.95
CCDC116Q8IYX3 AP001362.1-201ENST00000625165 124 ntBASIC2.88□□□□□ -1.95
CCDC116Q8IYX3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 SNORA2B-201ENST00000384583 137 ntBASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 RNU6-519P-201ENST00000410590 108 ntBASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 SUMO1P4-201ENST00000429430 302 ntBASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 snoU13.27-201ENST00000459278 104 ntBASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 SNORD14A-201ENST00000606526 91 ntBASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC116Q8IYX3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 MIR22-201ENST00000362190 85 ntBASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 Y_RNA.168-201ENST00000363740 102 ntBASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 UQCRHP3-201ENST00000451503 251 ntBASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 RNU7-43P-201ENST00000516554 64 ntBASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 RNA5SP137-201ENST00000516833 135 ntBASIC2.86□□□□□ -1.95
CCDC116Q8IYX3 SUB1P4-201ENST00000566062 339 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms