Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RNU6-580P-201ENST00000365159 107 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU6-484P-201ENST00000384016 107 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 MIR626-201ENST00000385032 94 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU6-913P-201ENST00000390913 95 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 SNORA40.5-201ENST00000391061 128 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU1-119P-201ENST00000391122 165 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU6-1109P-201ENST00000391187 107 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU6-651P-201ENST00000411040 105 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU7-73P-201ENST00000458743 63 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 SNORD2.1-201ENST00000458762 69 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU7-62P-201ENST00000458856 62 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 MTATP8P1-201ENST00000467115 207 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RPS29P24-201ENST00000486345 171 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU6-1299P-201ENST00000516316 100 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU6-635P-201ENST00000516651 102 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 RNU7-53P-201ENST00000516705 60 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 AP003072.1-201ENST00000531740 145 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 MIR4771-2-201ENST00000577758 74 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 MIR4771-1-201ENST00000582617 74 ntBASIC0.52□□□□□ -2.33
SKA3Q8IX90 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
SKA3Q8IX90 Y_RNA.432-201ENST00000384087 111 ntBASIC0.51□□□□□ -2.33
SKA3Q8IX90 SNORA26-201ENST00000391286 122 ntBASIC0.51□□□□□ -2.33
SKA3Q8IX90 RNU2-70P-201ENST00000410718 179 ntBASIC0.51□□□□□ -2.33
SKA3Q8IX90 HMGN1P33-201ENST00000432945 451 ntBASIC0.51□□□□□ -2.33
SKA3Q8IX90 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.51□□□□□ -2.33
SKA3Q8IX90 RMST_2.1-201ENST00000617263 136 ntBASIC0.51□□□□□ -2.33
SKA3Q8IX90 Y_RNA.82-201ENST00000363000 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.92-201ENST00000363043 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.235-201ENST00000364412 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.306-201ENST00000365015 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.312-201ENST00000365089 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.322-201ENST00000365151 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 RNU6-934P-201ENST00000365154 107 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.461-201ENST00000384263 103 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 MIR520F-201ENST00000384824 87 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 MIR520H-201ENST00000385126 88 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 MT-TT-201ENST00000387460 66 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.590-201ENST00000410140 107 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.622-201ENST00000411091 108 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.650-201ENST00000459002 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 RNU6-504P-201ENST00000516568 104 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.777-201ENST00000516982 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 MIR5000-201ENST00000577717 103 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.771-201ENST00000598668 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 uc_338.6-201ENST00000613544 171 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Y_RNA.789-201ENST00000622480 102 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 Z97988.1-201ENST00000637697 135 ntBASIC0.5□□□□□ -2.33
SKA3Q8IX90 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SKA3Q8IX90 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
SKA3Q8IX90 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.49□□□□□ -2.33
SKA3Q8IX90 RNU6-238P-201ENST00000363313 106 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 snoU2_19.4-201ENST00000364329 80 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 SNORA1.1-201ENST00000364671 133 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 Y_RNA.634-201ENST00000364811 113 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 RNY1P8-201ENST00000383970 114 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 Y_RNA.483-201ENST00000384380 101 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 MIR573-201ENST00000384964 99 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 MIR548I3-201ENST00000408378 149 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 AC244023.1-201ENST00000426884 112 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 AF228730.3-201ENST00000436691 102 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 AL138752.1-201ENST00000452964 351 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 RNU6-977P-201ENST00000516411 103 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 RNU6-1223P-201ENST00000517124 104 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 Y_RNA.720-201ENST00000517166 92 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 AL078603.1-201ENST00000603824 313 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 AC242498.1-201ENST00000604134 111 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 MIR6740-201ENST00000618268 113 ntBASIC0.49□□□□□ -2.33
SKA3Q8IX90 AC010332.2-201ENST00000613083 1904 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
SKA3Q8IX90 MIR335-201ENST00000362173 94 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 SNORA63C-201ENST00000364578 129 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 SNORA36.2-201ENST00000384004 127 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 RNY3P5-201ENST00000384127 102 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 SNORD38B-201ENST00000384690 67 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 MIR616-201ENST00000385293 97 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 AL606845.1-201ENST00000404881 255 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 RNU2-55P-201ENST00000411146 174 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 RNA5SP247-201ENST00000411181 105 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.48□□□□□ -2.33
SKA3Q8IX90 RNU7-96P-201ENST00000459535 64 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 RNU6-998P-201ENST00000515894 101 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 Y_RNA.679-201ENST00000516416 91 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.48□□□□□ -2.33
SKA3Q8IX90 AC006504.6-201ENST00000590142 199 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 AC097639.2-201ENST00000603159 172 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 MIR8062-201ENST00000621515 85 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 SNORD38B-202ENST00000625943 69 ntBASIC0.48□□□□□ -2.33
SKA3Q8IX90 Y_RNA.7-201ENST00000362352 102 ntBASIC0.47□□□□□ -2.33
SKA3Q8IX90 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
SKA3Q8IX90 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
SKA3Q8IX90 Y_RNA.199-201ENST00000364014 102 ntBASIC0.47□□□□□ -2.33
SKA3Q8IX90 RNU4-17P-201ENST00000365598 141 ntBASIC0.47□□□□□ -2.33
SKA3Q8IX90 Y_RNA.422-201ENST00000384054 114 ntBASIC0.47□□□□□ -2.33
SKA3Q8IX90 MT-TW-201ENST00000387382 68 ntBASIC0.47□□□□□ -2.33
SKA3Q8IX90 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms