Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 RNU2-13P-201ENST00000515909 113 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 MIR4419B-201ENST00000577260 68 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 AC243994.1-201ENST00000618627 109 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 AC008133.2-201ENST00000624540 351 ntBASIC1.86□□□□□ -2.11
LRRTM3Q86VH5 RNA5SP190-201ENST00000365222 118 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 SNORA51.10-201ENST00000384418 136 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 Y_RNA.494-201ENST00000384432 111 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 RPS29P29-201ENST00000456396 171 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 RNU7-197P-201ENST00000458836 62 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 SNORD13-201ENST00000459299 104 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 RNU6-947P-201ENST00000516264 106 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 SNORA25.15-201ENST00000516487 89 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 RNU6-902P-201ENST00000517212 91 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 MIR3664-201ENST00000579074 99 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 AL121890.5-201ENST00000620848 304 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.85□□□□□ -2.11
LRRTM3Q86VH5 MTND5P32-201ENST00000560711 1802 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 AP000648.3-201ENST00000623539 4507 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 Y_RNA.120-201ENST00000363304 110 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 MIR570-201ENST00000384917 97 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 AL035398.1-201ENST00000430869 322 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 RNU7-53P-201ENST00000516705 60 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 SCARNA15-202ENST00000516881 127 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 AL512310.8-201ENST00000550183 120 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 MIR4791-201ENST00000607666 84 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.84□□□□□ -2.11
LRRTM3Q86VH5 MIR302B-201ENST00000362188 73 ntBASIC1.83□□□□□ -2.12
LRRTM3Q86VH5 MIR342-201ENST00000362212 99 ntBASIC1.83□□□□□ -2.12
LRRTM3Q86VH5 RPS27P16-201ENST00000425758 201 ntBASIC1.83□□□□□ -2.12
LRRTM3Q86VH5 RNU6-998P-201ENST00000515894 101 ntBASIC1.83□□□□□ -2.12
LRRTM3Q86VH5 RNU6-426P-201ENST00000516464 97 ntBASIC1.83□□□□□ -2.12
LRRTM3Q86VH5 RNU6-958P-201ENST00000516995 106 ntBASIC1.83□□□□□ -2.12
LRRTM3Q86VH5 MIR4285-201ENST00000581001 85 ntBASIC1.83□□□□□ -2.12
LRRTM3Q86VH5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.83□□□□□ -2.12
LRRTM3Q86VH5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 RNA5SP48-201ENST00000363969 126 ntBASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 RNU1-133P-201ENST00000364867 167 ntBASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 Y_RNA.420-201ENST00000384043 110 ntBASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 SNORA24-201ENST00000384096 131 ntBASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 RNU6-460P-201ENST00000391158 108 ntBASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 MIR4255-201ENST00000579351 72 ntBASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 MIR4251-201ENST00000635819 61 ntBASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.82□□□□□ -2.12
LRRTM3Q86VH5 U8.1-201ENST00000362843 134 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 RNY1P11-201ENST00000363759 113 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 Y_RNA.568-201ENST00000384742 113 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 MIR613-201ENST00000385248 95 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 RNU7-41P-201ENST00000515917 61 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 AP001328.1-201ENST00000528550 176 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 AL096861.1-201ENST00000610899 123 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 AP001340.1-201ENST00000624405 217 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 AC010332.2-201ENST00000613083 1904 ntBASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
LRRTM3Q86VH5 SNORD50.2-201ENST00000365465 70 ntBASIC1.8□□□□□ -2.12
LRRTM3Q86VH5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.8□□□□□ -2.12
LRRTM3Q86VH5 RNU2-11P-201ENST00000459191 187 ntBASIC1.8□□□□□ -2.12
LRRTM3Q86VH5 RN7SKP88-201ENST00000516847 250 ntBASIC1.8□□□□□ -2.12
LRRTM3Q86VH5 7SK.8-201ENST00000612110 250 ntBASIC1.8□□□□□ -2.12
LRRTM3Q86VH5 7SK.11-201ENST00000615477 250 ntBASIC1.8□□□□□ -2.12
LRRTM3Q86VH5 7SK.13-201ENST00000622040 250 ntBASIC1.8□□□□□ -2.12
LRRTM3Q86VH5 AC091932.4-201ENST00000623386 200 ntBASIC1.8□□□□□ -2.12
LRRTM3Q86VH5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 RNU6-915P-201ENST00000364943 103 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 RNU6-187P-201ENST00000384139 106 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 AL603914.1-201ENST00000401964 204 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 AC108667.1-201ENST00000428618 249 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 RNU7-73P-201ENST00000458743 63 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 snoU13.16-201ENST00000459350 104 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 RNA5SP236-201ENST00000516169 116 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 MIR3192-201ENST00000584920 77 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 AP001485.1-201ENST00000604799 199 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 AL596211.1-201ENST00000569873 2277 ntBASIC1.79□□□□□ -2.12
LRRTM3Q86VH5 SNORA20-201ENST00000384662 132 ntBASIC1.78□□□□□ -2.12
LRRTM3Q86VH5 SNORA40-201ENST00000388090 126 ntBASIC1.78□□□□□ -2.12
LRRTM3Q86VH5 Y_RNA.690-201ENST00000516603 95 ntBASIC1.78□□□□□ -2.12
LRRTM3Q86VH5 AP000942.3-201ENST00000603702 160 ntBASIC1.78□□□□□ -2.12
LRRTM3Q86VH5 MIR502-201ENST00000606349 86 ntBASIC1.78□□□□□ -2.12
LRRTM3Q86VH5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.13
LRRTM3Q86VH5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 AL392103.1-201ENST00000447000 198 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 AL133373.1-201ENST00000497098 94 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 RNA5SP272-201ENST00000516095 111 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 Y_RNA.686-201ENST00000516548 134 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 Y_RNA.692-201ENST00000516627 105 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 RNU6-165P-201ENST00000517170 99 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 RNU2-60P-201ENST00000517290 128 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 AC091895.1-201ENST00000624494 256 ntBASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.77□□□□□ -2.13
LRRTM3Q86VH5 RNU6-704P-201ENST00000364162 103 ntBASIC1.76□□□□□ -2.13
LRRTM3Q86VH5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 249.5 ms