Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AL137067.1-201ENST00000615933 120 ntBASIC2.27□□□□□ -2.05
RUFY4Q6ZNE9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
RUFY4Q6ZNE9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
RUFY4Q6ZNE9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 RPL23AP6-201ENST00000446637 472 ntBASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 SNORD123-201ENST00000459473 70 ntBASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 RNU2-13P-201ENST00000515909 113 ntBASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 SNORA74.3-201ENST00000517108 154 ntBASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 MIR4287-201ENST00000579398 78 ntBASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 MIR5002-201ENST00000584713 97 ntBASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 AC025166.1-201ENST00000612411 163 ntBASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 ICE2P2-201ENST00000483823 2787 ntBASIC2.26□□□□□ -2.05
RUFY4Q6ZNE9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-457P-201ENST00000363999 107 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-690P-201ENST00000365242 106 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 SNORA24-201ENST00000384096 131 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-1144P-201ENST00000384247 104 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 Y_RNA.525-201ENST00000384570 113 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-476P-201ENST00000384726 107 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 MIR583-201ENST00000384846 75 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 MIR653-201ENST00000385279 96 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 MTATP6P29-201ENST00000415057 132 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 AC108729.3-201ENST00000513484 108 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-322P-201ENST00000516010 103 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 RNU7-53P-201ENST00000516705 60 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 FAM106DP-201ENST00000586416 501 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 AP000942.3-201ENST00000603702 160 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 SNRPGP19-201ENST00000603826 189 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 MIR6845-201ENST00000613182 61 ntBASIC2.25□□□□□ -2.05
RUFY4Q6ZNE9 AL596028.1-201ENST00000326971 197 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 MIR302B-201ENST00000362188 73 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-215P-201ENST00000365169 102 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 Y_RNA.537-201ENST00000384626 109 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-781P-201ENST00000516377 101 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 RNU7-43P-201ENST00000516554 64 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 MIR3683-201ENST00000580847 82 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 MIR4448-201ENST00000584360 86 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 AC002984.1-201ENST00000591692 448 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 AL670379.3-201ENST00000605040 251 ntBASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
RUFY4Q6ZNE9 AL596211.1-201ENST00000569873 2277 ntBASIC2.23□□□□□ -2.05
RUFY4Q6ZNE9 Y_RNA.366-201ENST00000365540 102 ntBASIC2.23□□□□□ -2.05
RUFY4Q6ZNE9 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
RUFY4Q6ZNE9 RPS29P29-201ENST00000456396 171 ntBASIC2.23□□□□□ -2.05
RUFY4Q6ZNE9 COX6CP6-201ENST00000490840 228 ntBASIC2.23□□□□□ -2.05
RUFY4Q6ZNE9 RNA5SP182-201ENST00000516064 82 ntBASIC2.23□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-240P-201ENST00000516098 97 ntBASIC2.23□□□□□ -2.05
RUFY4Q6ZNE9 IGKV1-22-201ENST00000524313 326 ntBASIC2.23□□□□□ -2.05
RUFY4Q6ZNE9 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
RUFY4Q6ZNE9 Y_RNA.164-201ENST00000363709 102 ntBASIC2.22□□□□□ -2.05
RUFY4Q6ZNE9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.22□□□□□ -2.05
RUFY4Q6ZNE9 MIR17-201ENST00000385012 84 ntBASIC2.22□□□□□ -2.05
RUFY4Q6ZNE9 Y_RNA.630-201ENST00000411370 108 ntBASIC2.22□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-919P-201ENST00000516731 104 ntBASIC2.22□□□□□ -2.05
RUFY4Q6ZNE9 SUMO2P16-201ENST00000519475 264 ntBASIC2.22□□□□□ -2.05
RUFY4Q6ZNE9 MIR548AR-201ENST00000582191 57 ntBASIC2.22□□□□□ -2.05
RUFY4Q6ZNE9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.22□□□□□ -2.05
RUFY4Q6ZNE9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.22□□□□□ -2.05
RUFY4Q6ZNE9 RNU6-1325P-201ENST00000364905 105 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 SNORD20-201ENST00000384550 80 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 RNA5SP261-201ENST00000410536 106 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 RNU7-73P-201ENST00000458743 63 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 RNU6-893P-201ENST00000458841 100 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 RNA5SP364-201ENST00000516938 78 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 MIR4299-201ENST00000577899 72 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 MIR5089-201ENST00000580047 84 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 MIR3935-201ENST00000583472 104 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 MIR8074-201ENST00000615081 81 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 MTND5P18-201ENST00000445624 1801 ntBASIC2.21□□□□□ -2.06
RUFY4Q6ZNE9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
RUFY4Q6ZNE9 Y_RNA.4-201ENST00000362333 112 ntBASIC2.2□□□□□ -2.06
RUFY4Q6ZNE9 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
RUFY4Q6ZNE9 MIR513A1-201ENST00000385138 129 ntBASIC2.2□□□□□ -2.06
RUFY4Q6ZNE9 MIR548A3-201ENST00000385297 97 ntBASIC2.2□□□□□ -2.06
RUFY4Q6ZNE9 MIR1263-201ENST00000408324 86 ntBASIC2.2□□□□□ -2.06
RUFY4Q6ZNE9 RNU2-11P-201ENST00000459191 187 ntBASIC2.2□□□□□ -2.06
RUFY4Q6ZNE9 RNU6-917P-201ENST00000516294 104 ntBASIC2.2□□□□□ -2.06
RUFY4Q6ZNE9 AC021443.1-201ENST00000604478 211 ntBASIC2.2□□□□□ -2.06
RUFY4Q6ZNE9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 MIR342-201ENST00000362212 99 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 Y_RNA.528-201ENST00000384575 108 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 SNORA40.18-201ENST00000391200 128 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 SNX2P2-201ENST00000424553 323 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 AC003989.2-201ENST00000440224 169 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 RNU7-67P-201ENST00000459003 62 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 RNA5SP233-201ENST00000459153 113 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 RNU6-1053P-201ENST00000515930 101 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 SNORD33.1-201ENST00000516213 88 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 SNORA44.1-201ENST00000517031 108 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 SNORA77B-201ENST00000578179 125 ntBASIC2.19□□□□□ -2.06
RUFY4Q6ZNE9 MIR3152-201ENST00000579801 74 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms