Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 Y_RNA.631-201ENST00000459607 101 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 AC112204.1-201ENST00000502591 103 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 TRAJ51-201ENST00000504127 63 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1□□□□□ -2.57
CSPG4Q6UVK1 MIR4520-1-201ENST00000582609 70 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 AC008507.2-201ENST00000588402 1176 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 Z84480.1-201ENST00000605131 311 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 AC104010.1-201ENST00000616889 150 ntBASIC-1□□□□□ -2.57
CSPG4Q6UVK1 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 SNORD115-28-201ENST00000363931 81 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNU6-195P-201ENST00000411352 109 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 snoU13.13-201ENST00000458842 104 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNU7-187P-201ENST00000458985 68 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNU6-625P-201ENST00000459412 107 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 MIR4703-201ENST00000577728 79 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 MIR5188-201ENST00000583467 113 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 AC245884.10-201ENST00000597355 337 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 AL080274.1-201ENST00000605565 220 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 AC022441.3-201ENST00000605737 136 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 AL121655.1-201ENST00000605811 308 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNU7-10P-201ENST00000607194 63 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 AL158063.1-201ENST00000615349 536 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNY1P2-201ENST00000364820 117 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNU4-20P-201ENST00000365601 151 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 SNORD116.1-201ENST00000365628 92 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNU2-61P-201ENST00000411069 191 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 MTATP6P20-201ENST00000414147 562 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNU7-167P-201ENST00000459160 62 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 Vault.3-201ENST00000516676 95 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 AC245505.1-201ENST00000556398 224 ntBASIC-1.01□□□□□ -2.57
CSPG4Q6UVK1 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 MIR527-201ENST00000385244 85 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 AC009961.2-201ENST00000435771 251 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 RNU7-175P-201ENST00000515915 61 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 RNU6-479P-201ENST00000516348 105 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 RNU1-54P-201ENST00000517181 120 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 AC122108.2-201ENST00000611946 526 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 U4.1-201ENST00000620349 87 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 AC009161.2-201ENST00000624626 138 ntBASIC-1.02□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 RNA5SP403-201ENST00000363598 108 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 RNU6-961P-201ENST00000363893 105 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 RNA5SP261-201ENST00000410536 106 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 AC023449.1-201ENST00000454464 154 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 TPTE2P5-203ENST00000458118 728 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 YWHAEP2-201ENST00000580066 112 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 AC093423.1-201ENST00000440817 142 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 AC016550.1-201ENST00000505348 785 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 AC141846.1-201ENST00000568348 142 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 MIR3941-201ENST00000582572 103 ntBASIC-1.03□□□□□ -2.57
CSPG4Q6UVK1 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 RNU6-429P-201ENST00000384582 108 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 AL606923.1-201ENST00000406616 190 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 RNU7-134P-201ENST00000458997 64 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 AP002963.1-201ENST00000530590 184 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 MIR4308-201ENST00000580634 81 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 RN7SKP299-201ENST00000606679 301 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 RNU6-169P-201ENST00000365336 107 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 AC073415.1-201ENST00000449240 153 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 MIR3139-201ENST00000579145 76 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 MIR3920-201ENST00000581751 86 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 AL163152.1-201ENST00000642001 374 ntBASIC-1.04□□□□□ -2.58
CSPG4Q6UVK1 MIR302B-201ENST00000362188 73 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 CYCSP46-201ENST00000423569 204 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 RNU7-141P-201ENST00000459304 62 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 AC004223.4-201ENST00000612426 332 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 AL133173.2-201ENST00000614270 90 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 AL607023.1-201ENST00000620045 248 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 RNU6-831P-201ENST00000384548 107 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 RNU6-476P-201ENST00000384726 107 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 RNU6-192P-201ENST00000391253 100 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 MIR889-201ENST00000401280 79 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 SNORA36B-201ENST00000410438 131 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms