Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 AC015712.3-201ENST00000559380 164 ntBASIC1.42□□□□□ -2.18
CCDC144NLQ6NUI1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC144NLQ6NUI1 MTND5P32-201ENST00000560711 1802 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 MIR342-201ENST00000362212 99 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 Y_RNA.52-201ENST00000362760 96 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 Y_RNA.400-201ENST00000383963 111 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 Y_RNA.497-201ENST00000384447 98 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 MIR9-3-201ENST00000385084 90 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 snoU13.25-201ENST00000458945 104 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 RNU7-80P-201ENST00000459562 61 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 AL133373.1-201ENST00000497098 94 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 AC108210.2-201ENST00000503681 201 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 RNU6-998P-201ENST00000515894 101 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 RNU6-1149P-201ENST00000516810 97 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 SCARNA15-202ENST00000516881 127 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 RNU6-958P-201ENST00000516995 106 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 MIR4769-201ENST00000584126 77 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 MIR6845-201ENST00000613182 61 ntBASIC1.41□□□□□ -2.18
CCDC144NLQ6NUI1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 AL161722.3-201ENST00000605789 2983 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 RNU6-1062P-201ENST00000383908 107 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 AL035398.1-201ENST00000430869 322 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 AC003989.2-201ENST00000440224 169 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 RNU6-237P-201ENST00000515985 71 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 RNU7-200P-201ENST00000516105 62 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 SNORA25.15-201ENST00000516487 89 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 RNU6-548P-201ENST00000517083 115 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 MIR8065-201ENST00000620577 100 ntBASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC144NLQ6NUI1 RNY1P11-201ENST00000363759 113 ntBASIC1.39□□□□□ -2.19
CCDC144NLQ6NUI1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.39□□□□□ -2.19
CCDC144NLQ6NUI1 Y_RNA.584-201ENST00000391090 114 ntBASIC1.39□□□□□ -2.19
CCDC144NLQ6NUI1 MIR513C-201ENST00000401352 84 ntBASIC1.39□□□□□ -2.19
CCDC144NLQ6NUI1 RNU2-11P-201ENST00000459191 187 ntBASIC1.39□□□□□ -2.19
CCDC144NLQ6NUI1 snoU13.16-201ENST00000459350 104 ntBASIC1.39□□□□□ -2.19
CCDC144NLQ6NUI1 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
CCDC144NLQ6NUI1 RNU7-53P-201ENST00000516705 60 ntBASIC1.39□□□□□ -2.19
CCDC144NLQ6NUI1 RNU7-70P-201ENST00000516941 66 ntBASIC1.39□□□□□ -2.19
CCDC144NLQ6NUI1 SNORA25.3-201ENST00000363205 127 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 Y_RNA.215-201ENST00000364204 112 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 Y_RNA.251-201ENST00000364551 99 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 AC245047.7-201ENST00000440265 293 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 RNU7-73P-201ENST00000458743 63 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 RNU7-197P-201ENST00000458836 62 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 SNORA31.2-201ENST00000516019 134 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 MIR4255-201ENST00000579351 72 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 MIR548X2-201ENST00000579776 100 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 AC091932.4-201ENST00000623386 200 ntBASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC144NLQ6NUI1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC144NLQ6NUI1 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.37□□□□□ -2.19
CCDC144NLQ6NUI1 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
CCDC144NLQ6NUI1 RPS29P11-201ENST00000496507 171 ntBASIC1.37□□□□□ -2.19
CCDC144NLQ6NUI1 SNORA25.12-201ENST00000516202 82 ntBASIC1.37□□□□□ -2.19
CCDC144NLQ6NUI1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.37□□□□□ -2.19
CCDC144NLQ6NUI1 MIR548AO-201ENST00000579992 96 ntBASIC1.37□□□□□ -2.19
CCDC144NLQ6NUI1 AL596211.1-201ENST00000569873 2277 ntBASIC1.37□□□□□ -2.19
CCDC144NLQ6NUI1 MIR302B-201ENST00000362188 73 ntBASIC1.36□□□□□ -2.19
CCDC144NLQ6NUI1 RNU1-133P-201ENST00000364867 167 ntBASIC1.36□□□□□ -2.19
CCDC144NLQ6NUI1 RNY1P5-201ENST00000383890 115 ntBASIC1.36□□□□□ -2.19
CCDC144NLQ6NUI1 Y_RNA.506-201ENST00000384494 102 ntBASIC1.36□□□□□ -2.19
CCDC144NLQ6NUI1 RNU6-913P-201ENST00000390913 95 ntBASIC1.36□□□□□ -2.19
CCDC144NLQ6NUI1 AP003716.2-201ENST00000528260 108 ntBASIC1.36□□□□□ -2.19
CCDC144NLQ6NUI1 MIR3683-201ENST00000580847 82 ntBASIC1.36□□□□□ -2.19
CCDC144NLQ6NUI1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 RNA5SP264-201ENST00000363115 107 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 RNA5SP99-201ENST00000364020 114 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 RNA5SP363-201ENST00000365072 115 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 SNORD18B-201ENST00000365659 72 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 Y_RNA.488-201ENST00000384403 102 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 RNU6-482P-201ENST00000391068 107 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 SNORA31.4-201ENST00000516049 129 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 RNA5SP236-201ENST00000516169 116 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 AL353997.5-201ENST00000618886 171 ntBASIC1.35□□□□□ -2.19
CCDC144NLQ6NUI1 MIR103A2-201ENST00000362154 78 ntBASIC1.34□□□□□ -2.19
CCDC144NLQ6NUI1 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
CCDC144NLQ6NUI1 Y_RNA.120-201ENST00000363304 110 ntBASIC1.34□□□□□ -2.19
CCDC144NLQ6NUI1 MIR569-201ENST00000385228 96 ntBASIC1.34□□□□□ -2.19
CCDC144NLQ6NUI1 MIR1302-7-201ENST00000408841 72 ntBASIC1.34□□□□□ -2.19
CCDC144NLQ6NUI1 MTATP6P21-201ENST00000440681 189 ntBASIC1.34□□□□□ -2.19
CCDC144NLQ6NUI1 RNU6-346P-201ENST00000516288 111 ntBASIC1.34□□□□□ -2.19
CCDC144NLQ6NUI1 RNU2-60P-201ENST00000517290 128 ntBASIC1.34□□□□□ -2.19
CCDC144NLQ6NUI1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.34□□□□□ -2.19
CCDC144NLQ6NUI1 RNU6-460P-201ENST00000391158 108 ntBASIC1.33□□□□□ -2.2
CCDC144NLQ6NUI1 MIR1185-1-201ENST00000408598 86 ntBASIC1.33□□□□□ -2.2
CCDC144NLQ6NUI1 AL392103.1-201ENST00000447000 198 ntBASIC1.33□□□□□ -2.2
CCDC144NLQ6NUI1 AP000942.3-201ENST00000603702 160 ntBASIC1.33□□□□□ -2.2
CCDC144NLQ6NUI1 AL020996.3-201ENST00000606617 222 ntBASIC1.33□□□□□ -2.2
CCDC144NLQ6NUI1 RNA5SP190-201ENST00000365222 118 ntBASIC1.32□□□□□ -2.2
CCDC144NLQ6NUI1 RNU6-125P-201ENST00000384505 107 ntBASIC1.32□□□□□ -2.2
CCDC144NLQ6NUI1 SNORA67.5-201ENST00000391036 107 ntBASIC1.32□□□□□ -2.2
CCDC144NLQ6NUI1 Y_RNA.686-201ENST00000516548 134 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms