Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.72□□□□□ -1.97
RNF43Q68DV7 Y_RNA.191-201ENST00000363972 113 ntBASIC2.72□□□□□ -1.97
RNF43Q68DV7 RNU6-652P-201ENST00000365488 107 ntBASIC2.72□□□□□ -1.97
RNF43Q68DV7 SNORD58A-201ENST00000383875 65 ntBASIC2.72□□□□□ -1.97
RNF43Q68DV7 RNA5SP181-201ENST00000410246 98 ntBASIC2.72□□□□□ -1.97
RNF43Q68DV7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF43Q68DV7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF43Q68DV7 STAG3L5P-204ENST00000443759 179 ntBASIC2.72□□□□□ -1.97
RNF43Q68DV7 RNA5SP33-201ENST00000516687 98 ntBASIC2.72□□□□□ -1.97
RNF43Q68DV7 RNU6-56P-201ENST00000516986 93 ntBASIC2.72□□□□□ -1.97
RNF43Q68DV7 AP006437.1-201ENST00000641440 3685 ntBASIC2.72□□□□□ -1.97
RNF43Q68DV7 SNORD115-2-201ENST00000362842 82 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 RNU6-776P-201ENST00000364403 104 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 RNU6-1022P-201ENST00000365049 104 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 SNORD115-20-201ENST00000365099 82 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 RNU6-160P-201ENST00000384591 107 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 U8.15-201ENST00000390947 134 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 AC073261.1-201ENST00000429409 121 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 snoU13.23-201ENST00000458863 104 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 IGLV3-17-201ENST00000519099 244 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 AC096720.1-201ENST00000604441 183 ntBASIC2.71□□□□□ -1.98
RNF43Q68DV7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF43Q68DV7 MIRLET7C-201ENST00000362160 84 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 RNU6-1313P-201ENST00000362622 102 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 SNORD116-10-201ENST00000363791 102 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 SNORA25B-201ENST00000365507 128 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 RNU6-424P-201ENST00000384367 105 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RNF43Q68DV7 RNU6-1319P-201ENST00000390855 104 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 RNU6-747P-201ENST00000390928 104 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 RNU6-241P-201ENST00000391148 104 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 MIR1262-201ENST00000408276 93 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 MIR1267-201ENST00000408723 78 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 RNU6-177P-201ENST00000411257 104 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 AC015922.2-201ENST00000435593 184 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 AC139453.2-201ENST00000487255 133 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.7□□□□□ -1.98
RNF43Q68DV7 MIR548BB-201ENST00000626714 66 ntBASIC2.7□□□□□ -1.98
RNF43Q68DV7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RNF43Q68DV7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RNF43Q68DV7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RNF43Q68DV7 SNORA22.1-201ENST00000362701 134 ntBASIC2.69□□□□□ -1.98
RNF43Q68DV7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.69□□□□□ -1.98
RNF43Q68DV7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF43Q68DV7 DEFB122-202ENST00000569013 197 ntBASIC2.69□□□□□ -1.98
RNF43Q68DV7 MIR376B-201ENST00000614515 100 ntBASIC2.69□□□□□ -1.98
RNF43Q68DV7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF43Q68DV7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RNF43Q68DV7 RNA5SP493-201ENST00000364115 91 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 SNORA1.1-201ENST00000364671 133 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 HMGN2P35-201ENST00000412164 270 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 AC108210.2-201ENST00000503681 201 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 AC108729.3-201ENST00000513484 108 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 Y_RNA.676-201ENST00000516393 96 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 RNA5SP402-201ENST00000517148 110 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 MIR3152-201ENST00000579801 74 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 MIR4439-201ENST00000583746 80 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 MIR8054-201ENST00000620877 86 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 AL442644.1-201ENST00000454390 3105 ntBASIC2.68□□□□□ -1.98
RNF43Q68DV7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF43Q68DV7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF43Q68DV7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
RNF43Q68DV7 RNU6-509P-201ENST00000363519 107 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 Y_RNA.247-201ENST00000364500 92 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 SNORA32-201ENST00000384072 121 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 Y_RNA.430-201ENST00000384081 110 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 Z98742.3-201ENST00000418637 326 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 AC090844.1-201ENST00000422019 156 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 RNU7-34P-201ENST00000459394 64 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.67□□□□□ -1.98
RNF43Q68DV7 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 AC103810.7-201ENST00000607821 91 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 AC027279.3-201ENST00000625055 122 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 MIR6841-201ENST00000637129 72 ntBASIC2.67□□□□□ -1.98
RNF43Q68DV7 RNU6-220P-201ENST00000390919 107 ntBASIC2.66□□□□□ -1.98
RNF43Q68DV7 RNA5SP425-201ENST00000410336 112 ntBASIC2.66□□□□□ -1.98
RNF43Q68DV7 RPS12P2-201ENST00000439728 269 ntBASIC2.66□□□□□ -1.98
RNF43Q68DV7 SNORA31.15-201ENST00000516771 132 ntBASIC2.66□□□□□ -1.98
RNF43Q68DV7 RNU6-958P-201ENST00000516995 106 ntBASIC2.66□□□□□ -1.98
RNF43Q68DV7 AC015712.3-201ENST00000559380 164 ntBASIC2.66□□□□□ -1.98
RNF43Q68DV7 RNU6-86P-201ENST00000606534 107 ntBASIC2.66□□□□□ -1.98
RNF43Q68DV7 MIR27B-201ENST00000385129 97 ntBASIC2.65□□□□□ -1.99
RNF43Q68DV7 SNORA26.6-201ENST00000391256 115 ntBASIC2.65□□□□□ -1.99
RNF43Q68DV7 MIR889-201ENST00000401280 79 ntBASIC2.65□□□□□ -1.99
RNF43Q68DV7 RNU4-53P-201ENST00000410828 140 ntBASIC2.65□□□□□ -1.99
RNF43Q68DV7 UBL5P1-201ENST00000507979 193 ntBASIC2.65□□□□□ -1.99
RNF43Q68DV7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF43Q68DV7 MIR3169-201ENST00000578032 83 ntBASIC2.65□□□□□ -1.99
RNF43Q68DV7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF43Q68DV7 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
RNF43Q68DV7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
RNF43Q68DV7 RNA5SP210-201ENST00000391034 120 ntBASIC2.64□□□□□ -1.99
RNF43Q68DV7 RNU6-482P-201ENST00000391068 107 ntBASIC2.64□□□□□ -1.99
RNF43Q68DV7 Y_RNA.607-201ENST00000410597 98 ntBASIC2.64□□□□□ -1.99
RNF43Q68DV7 Y_RNA.609-201ENST00000410669 89 ntBASIC2.64□□□□□ -1.99
RNF43Q68DV7 RNU6-1190P-201ENST00000410811 104 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms