Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AL365205.2-201ENST00000594586 68 ntBASIC1.55□□□□□ -2.16
TTC39AQ5SRH9 MIR7974-201ENST00000615835 79 ntBASIC1.55□□□□□ -2.16
TTC39AQ5SRH9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.55□□□□□ -2.16
TTC39AQ5SRH9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TTC39AQ5SRH9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 SNORA20-201ENST00000384662 132 ntBASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 HSPE1P24-201ENST00000450782 238 ntBASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 RNA5SP445-201ENST00000515889 115 ntBASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 RNU6-830P-201ENST00000516353 107 ntBASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 SNORA18.4-201ENST00000516440 124 ntBASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 AC068338.1-201ENST00000565567 176 ntBASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 MIR3646-201ENST00000578301 84 ntBASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.54□□□□□ -2.16
TTC39AQ5SRH9 RNY1P5-201ENST00000383890 115 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 SNORD26-201ENST00000384147 75 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 Y_RNA.488-201ENST00000384403 102 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 Y_RNA.494-201ENST00000384432 111 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 MIR569-201ENST00000385228 96 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 SNORD28B-201ENST00000390993 75 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 U8.17-201ENST00000391292 132 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 RPS29P29-201ENST00000456396 171 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 RNU6-426P-201ENST00000516464 97 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 RNU6-922P-201ENST00000516753 99 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 AC019176.1-201ENST00000518519 225 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 MIR6078-201ENST00000611069 100 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 AC134878.1-201ENST00000619901 243 ntBASIC1.53□□□□□ -2.16
TTC39AQ5SRH9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 AL442644.1-201ENST00000454390 3105 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.497-201ENST00000384447 98 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.542-201ENST00000384641 111 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 RNU6-460P-201ENST00000391158 108 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 RNA5SP127-201ENST00000411051 133 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 RNU7-197P-201ENST00000458836 62 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 SNORD123-201ENST00000459473 70 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 AP003484.1-201ENST00000530974 250 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 MIR548X2-201ENST00000579776 100 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 MIR548AR-201ENST00000582191 57 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
TTC39AQ5SRH9 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.241-201ENST00000364470 117 ntBASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 SNORD1A-201ENST00000364968 72 ntBASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 SNORA2.2-201ENST00000365473 135 ntBASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 RNU6-1189P-201ENST00000383958 107 ntBASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 MIR570-201ENST00000384917 97 ntBASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 MIR513C-201ENST00000401352 84 ntBASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 AC090049.2-201ENST00000550377 109 ntBASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 AP001485.1-201ENST00000604799 199 ntBASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.51□□□□□ -2.17
TTC39AQ5SRH9 MTND5P32-201ENST00000560711 1802 ntBASIC1.5□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.52-201ENST00000362760 96 ntBASIC1.5□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.251-201ENST00000364551 99 ntBASIC1.5□□□□□ -2.17
TTC39AQ5SRH9 RNU6-1292P-201ENST00000383856 107 ntBASIC1.5□□□□□ -2.17
TTC39AQ5SRH9 MIR624-201ENST00000385217 97 ntBASIC1.5□□□□□ -2.17
TTC39AQ5SRH9 MIR653-201ENST00000385279 96 ntBASIC1.5□□□□□ -2.17
TTC39AQ5SRH9 SNORA74.3-201ENST00000517108 154 ntBASIC1.5□□□□□ -2.17
TTC39AQ5SRH9 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.5□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.410-201ENST00000383992 113 ntBASIC1.49□□□□□ -2.17
TTC39AQ5SRH9 SNORD41-201ENST00000386967 70 ntBASIC1.49□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.584-201ENST00000391090 114 ntBASIC1.49□□□□□ -2.17
TTC39AQ5SRH9 AL451046.2-201ENST00000403074 277 ntBASIC1.49□□□□□ -2.17
TTC39AQ5SRH9 AC087499.4-201ENST00000448505 178 ntBASIC1.49□□□□□ -2.17
TTC39AQ5SRH9 AC090821.2-201ENST00000523552 176 ntBASIC1.49□□□□□ -2.17
TTC39AQ5SRH9 MIR5197-201ENST00000583721 112 ntBASIC1.49□□□□□ -2.17
TTC39AQ5SRH9 AC131055.1-201ENST00000584626 316 ntBASIC1.49□□□□□ -2.17
TTC39AQ5SRH9 SNORD33-201ENST00000362761 85 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 RNU6-508P-201ENST00000363231 103 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.343-201ENST00000365354 112 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 RNU6-53P-201ENST00000365367 106 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.420-201ENST00000384043 110 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.440-201ENST00000384120 114 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 MIR1276-201ENST00000408707 83 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 RPS26P48-201ENST00000491713 339 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 RNU6-322P-201ENST00000516010 103 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.686-201ENST00000516548 134 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 RNU6-1149P-201ENST00000516810 97 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 RNU2-60P-201ENST00000517290 128 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 AC091895.1-201ENST00000624494 256 ntBASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.48□□□□□ -2.17
TTC39AQ5SRH9 MIR342-201ENST00000362212 99 ntBASIC1.47□□□□□ -2.17
TTC39AQ5SRH9 Y_RNA.370-201ENST00000365589 108 ntBASIC1.47□□□□□ -2.17
TTC39AQ5SRH9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.47□□□□□ -2.17
TTC39AQ5SRH9 AC079140.2-201ENST00000506193 142 ntBASIC1.47□□□□□ -2.17
TTC39AQ5SRH9 MIR3937-201ENST00000580135 106 ntBASIC1.47□□□□□ -2.17
TTC39AQ5SRH9 MIR6504-201ENST00000613520 61 ntBASIC1.47□□□□□ -2.17
TTC39AQ5SRH9 SNORA27-201ENST00000384323 126 ntBASIC1.46□□□□□ -2.18
TTC39AQ5SRH9 Y_RNA.568-201ENST00000384742 113 ntBASIC1.46□□□□□ -2.18
TTC39AQ5SRH9 MIR520C-201ENST00000385005 87 ntBASIC1.46□□□□□ -2.18
TTC39AQ5SRH9 MIR518E-201ENST00000385252 88 ntBASIC1.46□□□□□ -2.18
TTC39AQ5SRH9 SNX2P2-201ENST00000424553 323 ntBASIC1.46□□□□□ -2.18
TTC39AQ5SRH9 SCARNA15-202ENST00000516881 127 ntBASIC1.46□□□□□ -2.18
TTC39AQ5SRH9 AL513534.2-201ENST00000603836 250 ntBASIC1.46□□□□□ -2.18
TTC39AQ5SRH9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TTC39AQ5SRH9 AC010332.2-201ENST00000613083 1904 ntBASIC1.45□□□□□ -2.18
TTC39AQ5SRH9 SNORD115-34-201ENST00000362441 82 ntBASIC1.45□□□□□ -2.18
TTC39AQ5SRH9 SNORD115-12-201ENST00000362583 82 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms